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TransRate: reference-free quality assessment of de novo transcriptome assemblies

TransRate is a tool for reference-free quality assessment of de novo transcriptome assemblies. Using only the sequenced reads and the assembly as input, we show that multiple common artifacts of de novo transcriptome assembly can be readily detected. These include chimeras, structural errors, incomp...

詳細記述

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書誌詳細
出版年:Genome Res
主要な著者: Smith-Unna, Richard, Boursnell, Chris, Patro, Rob, Hibberd, Julian M., Kelly, Steven
フォーマット: Artigo
言語:Inglês
出版事項: Cold Spring Harbor Laboratory Press 2016
主題:
オンライン・アクセス:https://ncbi.nlm.nih.gov/pmc/articles/PMC4971766/
https://ncbi.nlm.nih.gov/pubmed/27252236
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1101/gr.196469.115
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