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TransComb: genome-guided transcriptome assembly via combing junctions in splicing graphs
Transcriptome assemblers aim to reconstruct full-length transcripts from RNA-seq data. We present TransComb, a genome-guided assembler developed based on a junction graph, weighted by a bin-packing strategy and paired-end information. A newly designed extension method based on weighted junction grap...
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| Publicado en: | Genome Biol |
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| Main Authors: | , , , |
| Formato: | Artigo |
| Idioma: | Inglês |
| Publicado: |
BioMed Central
2016
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| Assuntos: | |
| Acceso en liña: | https://ncbi.nlm.nih.gov/pmc/articles/PMC5069867/ https://ncbi.nlm.nih.gov/pubmed/27760567 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-016-1074-1 |
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