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Accurate calculation of side chain packing and free energy with applications to protein molecular dynamics

To address the large gap between time scales that can be easily reached by molecular simulations and those required to understand protein dynamics, we present a rapid self-consistent approximation of the side chain free energy at every integration step. In analogy with the adiabatic Born-Oppenheimer...

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Detalhes bibliográficos
Publicado no:PLoS Comput Biol
Main Authors: Jumper, John M., Faruk, Nabil F., Freed, Karl F., Sosnick, Tobin R.
Formato: Artigo
Idioma:Inglês
Publicado em: Public Library of Science 2018
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC6307715/
https://ncbi.nlm.nih.gov/pubmed/30589846
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pcbi.1006342
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