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Accurate calculation of side chain packing and free energy with applications to protein molecular dynamics

To address the large gap between time scales that can be easily reached by molecular simulations and those required to understand protein dynamics, we present a rapid self-consistent approximation of the side chain free energy at every integration step. In analogy with the adiabatic Born-Oppenheimer...

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Detalles Bibliográficos
Publicado en:PLoS Comput Biol
Main Authors: Jumper, John M., Faruk, Nabil F., Freed, Karl F., Sosnick, Tobin R.
Formato: Artigo
Idioma:Inglês
Publicado: Public Library of Science 2018
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Acceso en liña:https://ncbi.nlm.nih.gov/pmc/articles/PMC6307715/
https://ncbi.nlm.nih.gov/pubmed/30589846
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pcbi.1006342
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