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Accurate calculation of side chain packing and free energy with applications to protein molecular dynamics

To address the large gap between time scales that can be easily reached by molecular simulations and those required to understand protein dynamics, we present a rapid self-consistent approximation of the side chain free energy at every integration step. In analogy with the adiabatic Born-Oppenheimer...

Täydet tiedot

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Bibliografiset tiedot
Julkaisussa:PLoS Comput Biol
Päätekijät: Jumper, John M., Faruk, Nabil F., Freed, Karl F., Sosnick, Tobin R.
Aineistotyyppi: Artigo
Kieli:Inglês
Julkaistu: Public Library of Science 2018
Aiheet:
Linkit:https://ncbi.nlm.nih.gov/pmc/articles/PMC6307715/
https://ncbi.nlm.nih.gov/pubmed/30589846
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pcbi.1006342
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