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MegaGTA: a sensitive and accurate metagenomic gene-targeted assembler using iterative de Bruijn graphs
BACKGROUND: The recent release of the gene-targeted metagenomics assembler Xander has demonstrated that using the trained Hidden Markov Model (HMM) to guide the traversal of de Bruijn graph gives obvious advantage over other assembly methods. Xander, as a pilot study, indeed has a lot of room for im...
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| Publicado en: | BMC Bioinformatics |
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| Autores principales: | , , , , , |
| Formato: | Artigo |
| Lenguaje: | Inglês |
| Publicado: |
BioMed Central
2017
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| Materias: | |
| Acceso en línea: | https://ncbi.nlm.nih.gov/pmc/articles/PMC5657035/ https://ncbi.nlm.nih.gov/pubmed/29072142 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-017-1825-3 |
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