metaSNV: A tool for metagenomic strain level analysis

We present metaSNV, a tool for single nucleotide variant (SNV) analysis in metagenomic samples, capable of comparing populations of thousands of bacterial and archaeal species. The tool uses as input nucleotide sequence alignments to reference genomes in standard SAM/BAM format, performs SNV calling...

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Bibliografske podrobnosti
izdano v:PLoS One
Main Authors: Costea, Paul Igor, Munch, Robin, Coelho, Luis Pedro, Paoli, Lucas, Sunagawa, Shinichi, Bork, Peer
Format: Artigo
Jezik:Inglês
Izdano: Public Library of Science 2017
Teme:
Research Article
Online dostop:https://ncbi.nlm.nih.gov/pmc/articles/PMC5533426/
https://ncbi.nlm.nih.gov/pubmed/28753663
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pone.0182392
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