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Conpair: concordance and contamination estimator for matched tumor–normal pairs

Motivation: Sequencing of matched tumor and normal samples is the standard study design for reliable detection of somatic alterations. However, even very low levels of cross-sample contamination significantly impact calling of somatic mutations, because contaminant germline variants can be incorrect...

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Detalhes bibliográficos
Publicado no:Bioinformatics
Main Authors: Bergmann, Ewa A., Chen, Bo-Juen, Arora, Kanika, Vacic, Vladimir, Zody, Michael C.
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2016
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC5048070/
https://ncbi.nlm.nih.gov/pubmed/27354699
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btw389
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