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A representation of a compressed de Bruijn graph for pan-genome analysis that enables search
BACKGROUND: Recently, Marcus et al. (Bioinformatics 30:3476–83, 2014) proposed to use a compressed de Bruijn graph to describe the relationship between the genomes of many individuals/strains of the same or closely related species. They devised an [Formula: see text] time algorithm called splitMEM t...
Αποθηκεύτηκε σε:
| Τόπος έκδοσης: | Algorithms Mol Biol |
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| Κύριοι συγγραφείς: | , |
| Μορφή: | Artigo |
| Γλώσσα: | Inglês |
| Έκδοση: |
BioMed Central
2016
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| Θέματα: | |
| Διαθέσιμο Online: | https://ncbi.nlm.nih.gov/pmc/articles/PMC4950428/ https://ncbi.nlm.nih.gov/pubmed/27437028 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13015-016-0083-7 |
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