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Informed kmer selection for de novo transcriptome assembly
Motivation: De novo transcriptome assembly is an integral part for many RNA-seq workflows. Common applications include sequencing of non-model organisms, cancer or meta transcriptomes. Most de novo transcriptome assemblers use the de Bruijn graph (DBG) as the underlying data structure. The quality o...
Tallennettuna:
| Julkaisussa: | Bioinformatics |
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| Päätekijät: | , |
| Aineistotyyppi: | Artigo |
| Kieli: | Inglês |
| Julkaistu: |
Oxford University Press
2016
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| Aiheet: | |
| Linkit: | https://ncbi.nlm.nih.gov/pmc/articles/PMC4892416/ https://ncbi.nlm.nih.gov/pubmed/27153653 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btw217 |
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