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Informed kmer selection for de novo transcriptome assembly
Motivation: De novo transcriptome assembly is an integral part for many RNA-seq workflows. Common applications include sequencing of non-model organisms, cancer or meta transcriptomes. Most de novo transcriptome assemblers use the de Bruijn graph (DBG) as the underlying data structure. The quality o...
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| Vydáno v: | Bioinformatics |
|---|---|
| Hlavní autoři: | , |
| Médium: | Artigo |
| Jazyk: | Inglês |
| Vydáno: |
Oxford University Press
2016
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| Témata: | |
| On-line přístup: | https://ncbi.nlm.nih.gov/pmc/articles/PMC4892416/ https://ncbi.nlm.nih.gov/pubmed/27153653 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btw217 |
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