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TopHat-Recondition: a post-processor for TopHat unmapped reads

BACKGROUND: TopHat is a popular spliced junction mapper for RNA sequencing data, and writes files in the BAM format – the binary version of the Sequence Alignment/Map (SAM) format. BAM is the standard exchange format for aligned sequencing reads, thus correct format implementation is paramount for s...

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Bibliographic Details
Published in:BMC Bioinformatics
Main Authors: Brueffer, Christian, Saal, Lao H.
Format: Artigo
Language:Inglês
Published: BioMed Central 2016
Subjects:
Online Access:https://ncbi.nlm.nih.gov/pmc/articles/PMC4855331/
https://ncbi.nlm.nih.gov/pubmed/27142976
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-016-1058-x
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