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Detection of differentially methylated regions from bisulfite-seq data by hidden Markov models incorporating genome-wide methylation level distributions

BACKGROUND: Detection of differential methylation between biological samples is an important task in bisulfite-seq data analysis. Several studies have attempted de novo finding of differentially methylated regions (DMRs) using hidden Markov models (HMMs). However, there is room for improvement in th...

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Bibliografske podrobnosti
izdano v:BMC Genomics
Main Authors: Saito, Yutaka, Mituyama, Toutai
Format: Artigo
Jezik:Inglês
Izdano: BioMed Central 2015
Teme:
Online dostop:https://ncbi.nlm.nih.gov/pmc/articles/PMC4682380/
https://ncbi.nlm.nih.gov/pubmed/26681544
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2164-16-S12-S3
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