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Stacking in RNA: NMR of Four Tetramers Benchmark Molecular Dynamics

[Image: see text] Molecular dynamics (MD) simulations for RNA tetramers r(AAAA), r(CAAU), r(GACC), and r(UUUU) are benchmarked against (1)H–(1)H NOESY distances and (3)J scalar couplings to test effects of RNA torsion parametrizations. Four different starting structures were used for r(AAAA), r(CAAU...

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Publicat a:J Chem Theory Comput
Autors principals: Condon, David E., Kennedy, Scott D., Mort, Brendan C., Kierzek, Ryszard, Yildirim, Ilyas, Turner, Douglas H.
Format: Artigo
Idioma:Inglês
Publicat: American Chemical Society 2015
Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC4463549/
https://ncbi.nlm.nih.gov/pubmed/26082675
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1021/ct501025q
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