Stacking in RNA: NMR of Four Tetramers Benchmark Molecular Dynamics

[Image: see text] Molecular dynamics (MD) simulations for RNA tetramers r(AAAA), r(CAAU), r(GACC), and r(UUUU) are benchmarked against (1)H–(1)H NOESY distances and (3)J scalar couplings to test effects of RNA torsion parametrizations. Four different starting structures were used for r(AAAA), r(CAAU...

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Bibliografske podrobnosti
izdano v:J Chem Theory Comput
Main Authors: Condon, David E., Kennedy, Scott D., Mort, Brendan C., Kierzek, Ryszard, Yildirim, Ilyas, Turner, Douglas H.
Format: Artigo
Jezik:Inglês
Izdano: American Chemical Society 2015
Online dostop:https://ncbi.nlm.nih.gov/pmc/articles/PMC4463549/
https://ncbi.nlm.nih.gov/pubmed/26082675
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1021/ct501025q
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