Optimization of an AMBER Force Field for the Artificial Nucleic Acid, LNA, and Benchmarking with NMR of L(CAAU)

समान संसाधन

• Stacking in RNA: NMR of Four Tetramers Benchmark Molecular Dynamics
  द्वारा: Condon, David E., और अन्य
  प्रकाशित: (2015)
• Benchmarking AMBER Force Fields for RNA: Comparisons to NMR Spectra for Single-Stranded r(GACC) Are Improved by Revised χ Torsions
  द्वारा: Yildirim, Ilyas, और अन्य
  प्रकाशित: (2011)
• Contributions of stacking, preorganization, and hydrogen bonding to the thermodynamic stability of duplexes between RNA and 2'-O-methyl RNA with Locked Nucleic Acids (LNA)
  द्वारा: Kierzek, Elzbieta, और अन्य
  प्रकाशित: (2009)
• Reparameterization of RNA χ Torsion Parameters for the AMBER Force Field and Comparison to NMR Spectra for Cytidine and Uridine
  द्वारा: Yildirim, Ilyas, और अन्य
  प्रकाशित: (2010)
• Revision of AMBER Torsional Parameters for RNA Improves Free Energy Predictions for Tetramer Duplexes with GC and iGiC Base Pairs
  द्वारा: Yildirim, Ilyas, और अन्य
  प्रकाशित: (2011)