Free Energy Landscape and Multiple Folding Pathways of an H-Type RNA Pseudoknot

How RNA sequences fold to specific tertiary structures is one of the key problems for understanding their dynamics and functions. Here, we study the folding process of an H-type RNA pseudoknot by performing a large-scale all-atom MD simulation and bias-exchange metadynamics. The folding free energy...

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Udgivet i:PLoS One
Main Authors: Bian, Yunqiang, Zhang, Jian, Wang, Jun, Wang, Jihua, Wang, Wei
Format: Artigo
Sprog:Inglês
Udgivet: Public Library of Science 2015
Fag:
Research Article
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC4451515/
https://ncbi.nlm.nih.gov/pubmed/26030098
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pone.0129089
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