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Evaluation of de novo transcriptome assemblies from RNA-Seq data

De novo RNA-Seq assembly facilitates the study of transcriptomes for species without sequenced genomes, but it is challenging to select the most accurate assembly in this context. To address this challenge, we developed a model-based score, RSEM-EVAL, for evaluating assemblies when the ground truth...

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Bibliografische gegevens
Gepubliceerd in:Genome Biol
Hoofdauteurs: Li, Bo, Fillmore, Nathanael, Bai, Yongsheng, Collins, Mike, Thomson, James A, Stewart, Ron, Dewey, Colin N
Formaat: Artigo
Taal:Inglês
Gepubliceerd in: BioMed Central 2014
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Online toegang:https://ncbi.nlm.nih.gov/pmc/articles/PMC4298084/
https://ncbi.nlm.nih.gov/pubmed/25608678
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-014-0553-5
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