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Combined computational design of a zinc binding site and a protein-protein interaction: one open zinc coordination sphere was not a robust hotspot for de novo ubiquitin binding

We computationally designed a de novo protein-protein interaction between wild-type ubiquitin and a redesigned scaffold. Our strategy was to incorporate zinc at the designed interface to promote affinity and orientation specificity. A large set of monomeric scaffold surfaces were computationally eng...

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Hlavní autoři: Der, Bryan S., Jha, Ramesh K., Lewis, Steven M., Thompson, Peter M., Guntas, Gurkan, Kuhlman, Brian
Médium: Artigo
Jazyk:Inglês
Vydáno: 2013
Témata:
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC4084500/
https://ncbi.nlm.nih.gov/pubmed/23504819
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1002/prot.24280
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