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Improving prokaryotic transposable elements identification using a combination of de novo and profile HMM methods

BACKGROUND: Insertion Sequences (ISs) and their non-autonomous derivatives (MITEs) are important components of prokaryotic genomes inducing duplication, deletion, rearrangement or lateral gene transfers. Although ISs and MITEs are relatively simple and basic genetic elements, their detection remains...

Ausführliche Beschreibung

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Bibliographische Detailangaben
Hauptverfasser: Kamoun, Choumouss, Payen, Thibaut, Hua-Van, Aurélie, Filée, Jonathan
Format: Artigo
Sprache:Inglês
Veröffentlicht: BioMed Central 2013
Schlagworte:
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC3852290/
https://ncbi.nlm.nih.gov/pubmed/24118975
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2164-14-700
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