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Improving prokaryotic transposable elements identification using a combination of de novo and profile HMM methods

BACKGROUND: Insertion Sequences (ISs) and their non-autonomous derivatives (MITEs) are important components of prokaryotic genomes inducing duplication, deletion, rearrangement or lateral gene transfers. Although ISs and MITEs are relatively simple and basic genetic elements, their detection remains...

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Библиографические подробности
Главные авторы: Kamoun, Choumouss, Payen, Thibaut, Hua-Van, Aurélie, Filée, Jonathan
Формат: Artigo
Язык:Inglês
Опубликовано: BioMed Central 2013
Предметы:
Online-ссылка:https://ncbi.nlm.nih.gov/pmc/articles/PMC3852290/
https://ncbi.nlm.nih.gov/pubmed/24118975
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2164-14-700
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