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Improving prokaryotic transposable elements identification using a combination of de novo and profile HMM methods

BACKGROUND: Insertion Sequences (ISs) and their non-autonomous derivatives (MITEs) are important components of prokaryotic genomes inducing duplication, deletion, rearrangement or lateral gene transfers. Although ISs and MITEs are relatively simple and basic genetic elements, their detection remains...

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Bibliografiske detaljer
Main Authors: Kamoun, Choumouss, Payen, Thibaut, Hua-Van, Aurélie, Filée, Jonathan
Format: Artigo
Sprog:Inglês
Udgivet: BioMed Central 2013
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC3852290/
https://ncbi.nlm.nih.gov/pubmed/24118975
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2164-14-700
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