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An experimentally-informed coarse-grained 3-site-per-nucleotide model of DNA: Structure, thermodynamics, and dynamics of hybridization

A new 3-Site-Per-Nucleotide coarse-grained model for DNA is presented. The model includes anisotropic potentials between bases involved in base stacking and base pair interactions that enable the description of relevant structural properties, including the major and minor grooves. In an improvement...

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Autors principals: Hinckley, Daniel M., Freeman, Gordon S., Whitmer, Jonathan K., de Pablo, Juan J.
Format: Artigo
Idioma:Inglês
Publicat: AIP Publishing LLC 2013
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Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC3808442/
https://ncbi.nlm.nih.gov/pubmed/24116642
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1063/1.4822042
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