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A coarse-grain three-site-per-nucleotide model for DNA with explicit ions

The “three sites per nucleotide” (3SPN) model provides a coarse-grained representation of nucleic acids for simulation of molecular processes. Previously, this model has relied on an implicit representation of the surrounding ionic environment at the level of Debye-Hückel theory. In this work, we el...

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Detalhes bibliográficos
Main Authors: Freeman, Gordon S., Hinckley, Daniel M., de Pablo, Juan J.
Formato: Artigo
Idioma:Inglês
Publicado em: American Institute of Physics 2011
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3221706/
https://ncbi.nlm.nih.gov/pubmed/22047269
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1063/1.3652956
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