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An experimentally-informed coarse-grained 3-site-per-nucleotide model of DNA: Structure, thermodynamics, and dynamics of hybridization

A new 3-Site-Per-Nucleotide coarse-grained model for DNA is presented. The model includes anisotropic potentials between bases involved in base stacking and base pair interactions that enable the description of relevant structural properties, including the major and minor grooves. In an improvement...

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Main Authors: Hinckley, Daniel M., Freeman, Gordon S., Whitmer, Jonathan K., de Pablo, Juan J.
格式: Artigo
語言:Inglês
出版: AIP Publishing LLC 2013
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在線閱讀:https://ncbi.nlm.nih.gov/pmc/articles/PMC3808442/
https://ncbi.nlm.nih.gov/pubmed/24116642
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1063/1.4822042
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