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How do alignment programs perform on sequencing data with varying qualities and from repetitive regions?

BACKGROUND: Next-generation sequencing technologies generate a significant number of short reads that are utilized to address a variety of biological questions. However, quite often, sequencing reads tend to have low quality at the 3’ end and are generated from the repetitive regions of a genome. It...

詳細記述

保存先:
書誌詳細
主要な著者: Yu, Xiaoqing, Guda, Kishore, Willis, Joseph, Veigl, Martina, Wang, Zhenghe, Markowitz, Sanford, Adams, Mark D, Sun, Shuying
フォーマット: Artigo
言語:Inglês
出版事項: BioMed Central 2012
主題:
オンライン・アクセス:https://ncbi.nlm.nih.gov/pmc/articles/PMC3414812/
https://ncbi.nlm.nih.gov/pubmed/22709551
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1756-0381-5-6
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