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Alta-Cyclic: a self-optimizing base caller for next-generation sequencing

Next-generation sequencing is limited to short read lengths and by high error rates. We systematically analyzed sources of noise in the Illumina Genome Analyzer that contribute to these high error rates and developed a base caller, Alta-Cyclic, that uses machine learning to compensate for noise fact...

Ausführliche Beschreibung

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Bibliographische Detailangaben
Hauptverfasser: Erlich, Yaniv, Mitra, Partha P, delaBastide, Melissa, McCombie, W Richard, Hannon, Gregory J
Format: Artigo
Sprache:Inglês
Veröffentlicht: 2008
Schlagworte:
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC2978646/
https://ncbi.nlm.nih.gov/pubmed/18604217
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1038/nmeth.1230
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