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Evaluation of haplotype callers for next-generation sequencing of viruses

Currently, the standard practice for assembling next-generation sequencing (NGS) reads of viral genomes is to summarize thousands of individual short reads into a single consensus sequence, thus confounding useful intra-host diversity information for molecular phylodynamic inference. It is hypothesi...

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Detalhes bibliográficos
Publicado no:Infect Genet Evol
Main Authors: Eliseev, Anton, Gibson, Keylie M., Avdeyev, Pavel, Novik, Dmitry, Bendall, Matthew L., Pérez-Losada, Marcos, Alexeev, Nikita, Crandall, Keith A.
Formato: Artigo
Idioma:Inglês
Publicado em: 2020
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC7293574/
https://ncbi.nlm.nih.gov/pubmed/32151775
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1016/j.meegid.2020.104277
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