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Molecular dynamics simulations of RNA kissing–loop motifs reveal structural dynamics and formation of cation-binding pockets

Explicit solvent molecular dynamics (MD) simulations were carried out for three RNA kissing–loop complexes. The theoretical structure of two base pairs (2 bp) complex of H3 stem–loop of Moloney murine leukemia virus agrees with the NMR structure with modest violations of few NMR restraints comparabl...

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Bibliografski detalji
Glavni autori: Réblová, Kamila, Špačková, Nad'a, Šponer, Judit E., Koča, Jaroslav, Šponer, Jiří
Format: Artigo
Jezik:Inglês
Izdano: Oxford University Press 2003
Teme:
Online pristup:https://ncbi.nlm.nih.gov/pmc/articles/PMC290250/
https://ncbi.nlm.nih.gov/pubmed/14627827
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gkg880
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