Non-Watson-Crick Basepairing and Hydration in RNA Motifs: Molecular Dynamics of 5S rRNA Loop E

Explicit solvent and counterion molecular dynamics simulations have been carried out for a total of >80 ns on the bacterial and spinach chloroplast 5S rRNA Loop E motifs. The Loop E sequences form unique duplex architectures composed of seven consecutive non-Watson-Crick basepairs. The starting s...

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Detalhes bibliográficos
Main Authors: Réblová, Kamila, Špačková, Nad'a, Štefl, Richard, Csaszar, Kristina, Koča, Jaroslav, Leontis, Neocles B., Šponer, Jiří
Formato: Artigo
Idioma:Inglês
Publicado em: Biophysical Society 2003
Assuntos:
Biophysical Theory and Modeling
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC1302943/
https://ncbi.nlm.nih.gov/pubmed/12770867
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