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Predictive modelling of topology and loop variations in dimeric DNA quadruplex structures

We have used a combination of simulated annealing (SA), molecular dynamics (MD) and locally enhanced sampling (LES) methods in order to predict the favourable topologies and loop conformations of dimeric DNA quadruplexes with T2 or T3 loops. This follows on from our previous MD simulation studies on...

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Detalhes bibliográficos
Main Authors: Hazel, Pascale, Parkinson, Gary N, Neidle, Stephen
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2006
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC1449907/
https://ncbi.nlm.nih.gov/pubmed/16641317
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gkl182
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