ReAS: Recovery of Ancestral Sequences for Transposable Elements from the Unassembled Reads of a Whole Genome Shotgun

We describe an algorithm, ReAS, to recover ancestral sequences for transposable elements (TEs) from the unassembled reads of a whole genome shotgun. The main assumptions are that these TEs must exist at high copy numbers across the genome and must not be so old that they are no longer recognizable i...

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Autores principales: Li, Ruiqiang, Ye, Jia, Li, Songgang, Wang, Jing, Han, Yujun, Ye, Chen, Wang, Jian, Yang, Huanming, Yu, Jun, Wong, Gane Ka-Shu, Wang, Jun
Formato: Artigo
Lenguaje:Inglês
Publicado: Public Library of Science 2005
Materias:
Research Article
Acceso en línea:https://ncbi.nlm.nih.gov/pmc/articles/PMC1232128/
https://ncbi.nlm.nih.gov/pubmed/16184192
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pcbi.0010043
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