ReAS: Recovery of Ancestral Sequences for Transposable Elements from the Unassembled Reads of a Whole Genome Shotgun

We describe an algorithm, ReAS, to recover ancestral sequences for transposable elements (TEs) from the unassembled reads of a whole genome shotgun. The main assumptions are that these TEs must exist at high copy numbers across the genome and must not be so old that they are no longer recognizable i...

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Bibliografiske detaljer
Main Authors: Li, Ruiqiang, Ye, Jia, Li, Songgang, Wang, Jing, Han, Yujun, Ye, Chen, Wang, Jian, Yang, Huanming, Yu, Jun, Wong, Gane Ka-Shu, Wang, Jun
Format: Artigo
Sprog:Inglês
Udgivet: Public Library of Science 2005
Fag:
Research Article
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC1232128/
https://ncbi.nlm.nih.gov/pubmed/16184192
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pcbi.0010043
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