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Improved inference of site-specific positive selection under a generalized parametric codon model when there are multinucleotide mutations and multiple nonsynonymous rates

Abstract Background An excess of nonsynonymous substitutions, over neutrality, is considered evidence of positive Darwinian selection. Inference for proteins often relies on estimation of the nonsynonymous to synonymous ratio (ω = d N/d S) within a codon model. However, to ease computational difficu...

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主要な著者: Katherine A. Dunn, Toby Kenney, Hong Gu, Joseph P. Bielawski
フォーマット: Artigo
言語:Inglês
出版事項: BMC 2019-01-01
シリーズ:BMC Evolutionary Biology
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オンライン・アクセス:http://link.springer.com/article/10.1186/s12862-018-1326-7
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