The Modular Organization of Domain Structures: Insights into Protein–Protein Binding

par del Sol, Antonio, Carbonell, Pablo
Publié 2007

FIGG: Simulating populations of whole genome sequences for heterogeneous data analyses

par Killcoyne, Sarah, del Sol, Antonio
Publié 2014

Identification of large-scale genomic variation in cancer genomes using in silico reference models

par Killcoyne, Sarah, del Sol, Antonio
Publié dans Nucleic Acids Res (2016)

Identifying niche‐mediated regulatory factors of stem cell phenotypic state: a systems biology approach

par Ravichandran, Srikanth, del Sol, Antonio
Publié dans FEBS Lett (2017)

A general computational approach to predicting synergistic transcriptional cores that determine cell subpopulation identities

par Okawa, Satoshi, del Sol, Antonio
Publié dans Nucleic Acids Res (2019)

Multiomics data integration unveils core transcriptional regulatory networks governing cell-type identity

par Jung, Sascha, del Sol, Antonio
Publié dans NPJ Syst Biol Appl (2020)

Modeling heterogeneity in the pluripotent state: A promising strategy for improving the efficiency and fidelity of stem cell differentiation

par Espinosa Angarica, Vladimir, del Sol, Antonio
Publié dans Bioessays (2016)

Evolutionary Conservation and Network Structure Characterize Genes of Phenotypic Relevance for Mitosis in Human

par Ostaszewski, Marek, Eifes, Serge, del Sol, Antonio
Publié 2012

Integrative Computational Network Analysis Reveals Site-Specific Mediators of Inflammation in Alzheimer's Disease

par Ravichandran, Srikanth, Michelucci, Alessandro, del Sol, Antonio
Publié dans Front Physiol (2018)

Energetic determinants of protein binding specificity: Insights into protein interaction networks

par Carbonell, Pablo, Nussinov, Ruth, del Sol, Antonio
Publié dans Proteomics (2009)

SigHotSpotter: scRNA-seq-based computational tool to control cell subpopulation phenotypes for cellular rejuvenation strategies

par Ravichandran, Srikanth, Hartmann, András, del Sol, Antonio
Publié dans Bioinformatics (2020)

FunRes: resolving tissue-specific functional cell states based on a cell–cell communication network model

par Jung, Sascha, Singh, Kartikeya, del Sol, Antonio
Publié dans Brief Bioinform (2020)

Protein allostery, signal transmission and dynamics: a classification scheme of allosteric mechanisms

par Tsai, Chung-Jung, del Sol, Antonio, Nussinov, Ruth
Publié 2009

TransSynW: A single‐cell RNA‐sequencing based web application to guide cell conversion experiments

par Ribeiro, Mariana Messias, Okawa, Satoshi, del Sol, Antonio
Publié dans Stem Cells Transl Med (2020)

Residues crucial for maintaining short paths in network communication mediate signaling in proteins

par del Sol, Antonio, Fujihashi, Hirotomo, Amoros, Dolors, Nussinov, Ruth
Publié 2006

Residue centrality, functionally important residues, and active site shape: Analysis of enzyme and non-enzyme families

par del Sol, Antonio, Fujihashi, Hirotomo, Amoros, Dolors, Nussinov, Ruth
Publié 2006

Discrete Logic Modelling Optimization to Contextualize Prior Knowledge Networks Using PRUNET

par Rodriguez, Ana, Crespo, Isaac, Fournier, Anna, del Sol, Antonio
Publié dans PLoS One (2015)

SeesawPred: A Web Application for Predicting Cell-fate Determinants in Cell Differentiation

par Hartmann, András, Okawa, Satoshi, Zaffaroni, Gaia, del Sol, Antonio
Publié dans Sci Rep (2018)

The Origin of Allosteric Functional Modulation: Multiple Pre-existing Pathways

par del Sol, Antonio, Tsai, Chung-Jung, Ma, Buyong, Nussinov, Ruth
Publié 2009

Predicting missing expression values in gene regulatory networks using a discrete logic modeling optimization guided by network stable states

par Crespo, Isaac, Krishna, Abhimanyu, Le Béchec, Antony, del Sol, Antonio
Publié 2013