MATRIX FACTORIZATION-BASED DATA FUSION FOR GENE FUNCTION PREDICTION IN BAKER’S YEAST AND SLIME MOLD

Por ŽITNIK, MARINKA, ZUPAN, BLAŽ
Publicado em 2014

Gene network inference by probabilistic scoring of relationships from a factorized model of interactions

Por Žitnik, Marinka, Zupan, Blaž
Publicado no Bioinformatics (2014)

Data Imputation in Epistatic MAPs by Network-Guided Matrix Completion

Por Žitnik, Marinka, Zupan, Blaž
Publicado no J Comput Biol (2015)

Gene network inference by fusing data from diverse distributions

Por Žitnik, Marinka, Zupan, Blaž
Publicado no Bioinformatics (2015)

COLLECTIVE PAIRWISE CLASSIFICATION FOR MULTI-WAY ANALYSIS OF DISEASE AND DRUG DATA

Por ZITNIK, MARINKA, ZUPAN, BLAZ
Publicado no Pac Symp Biocomput (2016)

Jumping across biomedical contexts using compressive data fusion

Por Zitnik, Marinka, Zupan, Blaz
Publicado no Bioinformatics (2016)

SNPsyn: detection and exploration of SNP–SNP interactions

Por Curk, Tomaz, Rot, Gregor, Zupan, Blaz
Publicado em 2011

Scalable non-negative matrix tri-factorization

Por Čopar, Andrej, žitnik, Marinka, Zupan, Blaž
Publicado no BioData Min (2017)

FragViz: visualization of fragmented networks

Por Zupan Blaž, Mramor Minca, Štajdohar Miha, Demšar Janez
Publicado em 2010-09-01

GenePath: from mutations to genetic networks and back

Por Juvan, Peter, Demsar, Janez, Shaulsky, Gad, Zupan, Blaz
Publicado em 2005

Does replication groups scoring reduce false positive rate in SNP interaction discovery?

Por Toplak, Marko, Curk, Tomaz, Demsar, Janez, Zupan, Blaz
Publicado em 2010

FragViz: visualization of fragmented networks

Por Štajdohar, Miha, Mramor, Minca, Zupan, Blaž, Demšar, Janez
Publicado em 2010

Heterogeneous computing architecture for fast detection of SNP-SNP interactions

Por Sluga, Davor, Curk, Tomaz, Zupan, Blaz, Lotric, Uros
Publicado no BMC Bioinformatics (2014)

Sieve-based relation extraction of gene regulatory networks from biological literature

Por Žitnik, Slavko, Žitnik, Marinka, Zupan, Blaž, Bajec, Marko
Publicado no BMC Bioinformatics (2015)

Discovering disease-disease associations by fusing systems-level molecular data

Por Žitnik, Marinka, Janjić, Vuk, Larminie, Chris, Zupan, Blaž, Pržulj, Nataša
Publicado em 2013

Orthogonal matrix factorization enables integrative analysis of multiple RNA binding proteins

Por Stražar, Martin, Žitnik, Marinka, Zupan, Blaž, Ule, Jernej, Curk, Tomaž
Publicado no Bioinformatics (2016)

Developmentally Regulated DNA Methylation in Dictyostelium discoideum

Por Katoh, Mariko, Curk, Tomaz, Xu, Qikai, Zupan, Blaz, Kuspa, Adam, Shaulsky, Gad
Publicado em 2006

dictyExpress: a Dictyostelium discoideum gene expression database with an explorative data analysis web-based interface

Por Rot, Gregor, Parikh, Anup, Curk, Tomaz, Kuspa, Adam, Shaulsky, Gad, Zupan, Blaz
Publicado em 2009

Gene Prioritization by Compressive Data Fusion and Chaining

Por Žitnik, Marinka, Nam, Edward A., Dinh, Christopher, Kuspa, Adam, Shaulsky, Gad, Zupan, Blaž
Publicado no PLoS Comput Biol (2015)

Gene discovery by chemical mutagenesis and whole-genome sequencing in Dictyostelium

Por Li, Cheng-Lin Frank, Santhanam, Balaji, Webb, Amanda Nicole, Zupan, Blaž, Shaulsky, Gad
Publicado no Genome Res (2016)