Progress in Super Long Loop Prediction

Por Zhao, Suwen, Zhu, Kai, Li, Jianing, Friesner, Richard A.
Publicado em 2011

Leveraging structure for enzyme function prediction: methods, opportunities and challenges

Por Jacobson, Matthew P., Kalyanaraman, Chakrapani, Zhao, Suwen, Tian, Boxue
Publicado em 2014

Toward better refinement of comparative models: Predicting loops in inexact environments

Por Sellers, Benjamin D., Zhu, Kai, Zhao, Suwen, Friesner, Richard A., Jacobson, Matthew P.
Publicado em 2008

The VSGB 2.0 Model: A Next Generation Energy Model for High Resolution Protein Structure Modeling

Por Li, Jianing, Abel, Robert, Zhu, Kai, Cao, Yixiang, Zhao, Suwen, Friesner, Richard A.
Publicado em 2011

Therapeutic hypertension system based on a microbreathing pressure sensor system

Por Diao, Ziji, Liu, Hongying, Zhu, Lan, Gao, Xiaoqiang, Zhao, Suwen, Pi, Xitian, Zheng, Xiaolin
Publicado em 2011

Predicting Enzyme-Substrate Specificity with QM/MM Methods: A Case Study of the Stereo-specificity of D-glucarate Dehydratase

Por Tian, Boxue, Wallrapp, Frank, Kalyanaraman, Chakrapani, Zhao, Suwen, Eriksson, Leif A., Jacobson, Matthew P.
Publicado em 2013

Prediction of Long Loops with Embedded Secondary Structure using the Protein Local Optimization Program

Por Miller, Edward B., Murrett, Colleen S., Zhu, Kai, Zhao, Suwen, Goldfeld, Dahlia A., Bylund, Joseph H., Friesner, Richard A.
Publicado em 2013

Lgr5-positive cells in the lung and their clinical significance in patients with lung adenocarcinoma

Por Zhang, Xiaohan, Xu, Miao, Su, Shixin, Zhou, Zeqi, Yang, Hong, Zhao, Suwen, Zeng, Danni, Yang, Kaiying, Liu, Yanan, Wang, Lijing, Li, Jiangchao
Publicado no Mol Clin Oncol (2016)

Prediction and Biochemical Demonstration of a Catabolic Pathway for the Osmoprotectant Proline Betaine

Por Kumar, Ritesh, Zhao, Suwen, Vetting, Matthew W., Wood, B. McKay, Sakai, Ayano, Cho, Kyuil, Solbiati, José, Almo, Steven C., Sweedler, Jonathan V., Jacobson, Matthew P., Gerlt, John A., Cronan, John E.
Publicado em 2014

Assignment of function to a domain of unknown function: DUF1537 is a new kinase family in catabolic pathways for acid sugars

Por Zhang, Xinshuai, Carter, Michael S., Vetting, Matthew W., San Francisco, Brian, Zhao, Suwen, Al-Obaidi, Nawar F., Solbiati, Jose O., Thiaville, Jennifer J., de Crécy-Lagard, Valérie, Jacobson, Matthew P., Almo, Steven C., Gerlt, John A.
Publicado no Proc Natl Acad Sci U S A (2016)

Discovery of new enzymes and metabolic pathways using structure and genome context

Por Zhao, Suwen, Kumar, Ritesh, Sakai, Ayano, Vetting, Matthew W., Wood, B. McKay, Brown, Shoshana, Bonanno, Jeffery B., Hillerich, Brandan S., Seidel, Ronald D., Babbitt, Patricia C., Almo, Steven C., Sweedler, Jonathan V., Gerlt, John A., Cronan, John E., Jacobson, Matthew P.
Publicado em 2013

Prediction and characterization of enzymatic activities guided by sequence similarity and genome neighborhood networks

Por Zhao, Suwen, Sakai, Ayano, Zhang, Xinshuai, Vetting, Matthew W, Kumar, Ritesh, Hillerich, Brandan, San Francisco, Brian, Solbiati, Jose, Steves, Adam, Brown, Shoshana, Akiva, Eyal, Barber, Alan, Seidel, Ronald D, Babbitt, Patricia C, Almo, Steven C, Gerlt, John A, Jacobson, Matthew P
Publicado em 2014

Experimental Strategies for Functional Annotation and Metabolism Discovery: Targeted Screening of Solute Binding Proteins and Unbiased Panning of Metabolomes

Por Vetting, Matthew W., Al-Obaidi, Nawar, Zhao, Suwen, San Francisco, Brian, Kim, Jungwook, Wichelecki, Daniel J., Bouvier, Jason T., Solbiati, Jose O., Vu, Hoan, Zhang, Xinshuai, Rodionov, Dmitry A., Love, James D., Hillerich, Brandan S., Seidel, Ronald D., Quinn, Ronald J., Osterman, Andrei L., Cronan, John E., Jacobson, Matthew P., Gerlt, John A., Almo, Steven C.
Publicado no Biochemistry (2014)

Crystal Structure of the Human Cannabinoid Receptor CB(1)

Por Hua, Tian, Vemuri, Kiran, Pu, Mengchen, Qu, Lu, Han, Gye Won, Wu, Yiran, Zhao, Suwen, Shui, Wenqing, Li, Shanshan, Korde, Anisha, Laprairie, Robert B., Stahl, Edward L., Ho, Jo-Hao, Zvonok, Nikolai, Zhou, Han, Kufareva, Irina, Wu, Beili, Zhao, Qiang, Hanson, Michael A., Bohn, Laura M., Makriyannis, Alexandros, Stevens, Raymond C., Liu, Zhi-Jie
Publicado no Cell (2016)