Conformational preference of ChaK1 binding peptides: a molecular dynamics study

Por Zhang, Jiajing, King, Christopher A, Dalby, Kevin, Ren, Pengyu
Publicado em 2010

Modeling Structural Coordination and Ligand Binding in Zinc Proteins with a Polarizable Potential

Por Zhang, Jiajing, Yang, Wei, Piquemal, Jean-Philip, Ren, Pengyu
Publicado em 2012

Trypsin-Ligand Binding Free Energies from Explicit and Implicit Solvent Simulations with Polarizable Potential

Por Jiao, Dian, Zhang, Jiajing, Duke, Robert E., Li, Guohui, Ren, Pengyu
Publicado em 2009

ZNF750 interacts with KLF4 and RCOR1, KDM1A, and CTBP1/2 chromatin regulators to repress epidermal progenitor genes and induce differentiation genes

Por Boxer, Lisa D., Barajas, Brook, Tao, Shiying, Zhang, Jiajing, Khavari, Paul A.
Publicado em 2014

A mammalian pseudogene lncRNA at the interface of inflammation and anti-inflammatory therapeutics

Por Rapicavoli, Nicole A, Qu, Kun, Zhang, Jiajing, Mikhail, Megan, Laberge, Remi-Martin, Chang, Howard Y
Publicado em 2013

The Polarizable Atomic Multipole-based AMOEBA Force Field for Proteins

Por Shi, Yue, Xia, Zhen, Zhang, Jiajing, Best, Robert, Wu, Chuanjie, Ponder, Jay W., Ren, Pengyu
Publicado em 2013

Biomolecular electrostatics and solvation: a computational perspective

Por Ren, Pengyu, Chun, Jaehun, Thomas, Dennis G., Schnieders, Michael J., Marucho, Marcelo, Zhang, Jiajing, Baker, Nathan A.
Publicado em 2012

IQGAP1 scaffold-kinase interaction blockade selectively targets RAS-MAP kinase–driven tumors

Por Jameson, Katherine L, Mazur, Pawel K, Zehnder, Ashley M, Zhang, Jiajing, Zarnegar, Brian, Sage, Julien, Khavari, Paul A
Publicado em 2013

A novel ATAC-seq approach reveals lineage-specific reinforcement of the open chromatin landscape via cooperation between BAF and p63

Por Bao, Xiaomin, Rubin, Adam J., Qu, Kun, Zhang, Jiajing, Giresi, Paul G., Chang, Howard Y., Khavari, Paul A.
Publicado no Genome Biol (2015)

Quantitative analysis of mammalian translation initiation sites by FACS-seq

Por Noderer, William L, Flockhart, Ross J, Bhaduri, Aparna, Diaz de Arce, Alexander J, Zhang, Jiajing, Khavari, Paul A, Wang, Clifford L
Publicado no Mol Syst Biol (2014)

Landscape and variation of RNA secondary structure across the human transcriptome

Por Wan, Yue, Qu, Kun, Zhang, Qiangfeng Cliff, Flynn, Ryan A., Manor, Ohad, Ouyang, Zhengqing, Zhang, Jiajing, Spitale, Robert C., Snyder, Michael P., Segal, Eran, Chang, Howard Y.
Publicado em 2014

Targeted disruption of Hotair leads to homeotic transformation and gene de-repression

Por Li, Lingjie, Liu, Bo, Wapinski, Orly L., Tsai, Miao-Chih, Qu, Kun, Zhang, Jiajing, Carlson, Jeff C., Lin, Meihong, Fang, Fengqin, Gupta, Rajnish A., Helms, Jill A., Chang, Howard Y.
Publicado em 2013

A LncRNA-MAF:MAFB Transcription Factor Network Regulates Epidermal Differentiation

Por Lopez-Pajares, Vanessa, Qu, Kun, Zhang, Jiajing, Webster, Dan E., Barajas, Brook C., Siprashvili, Zurab, Zarnegar, Brian J., Boxer, Lisa D., Rios, Eon J., Tao, Shiying, Kretz, Markus, Khavari, Paul A.
Publicado no Dev Cell (2015)

An Integrated Cell Purification and Genomics Strategy Reveals Multiple Regulators of Pancreas Development

Por Benitez, Cecil M., Qu, Kun, Sugiyama, Takuya, Pauerstein, Philip T., Liu, Yinghua, Tsai, Jennifer, Gu, Xueying, Ghodasara, Amar, Arda, H. Efsun, Zhang, Jiajing, Dekker, Joseph D., Tucker, Haley O., Chang, Howard Y., Kim, Seung K.
Publicado em 2014

m(6)A RNA modification controls cell fate transition in mammalian embryonic stem cells

Por Batista, Pedro J, Molinie, Benoit, Wang, Jinkai, Qu, Kun, Zhang, Jiajing, Li, Lingjie, Bouley, Donna M, Lujan, Ernesto, Haddad, Bahareh, Daneshvar, Kaveh, Carter, Ava C, Flynn, Ryan A, Zhou, Chan, Lim, Kok-Seong, Dedon, Peter, Wernig, Marius, Mullen, Alan C, Xing, Yi, Giallourakis, Cosmas C, Chang, Howard Y
Publicado no Cell Stem Cell (2014)