Hydrophobic Core Formation and Dehydration in Protein Folding Studied by Generalized-Ensemble Simulations

Por Yoda, Takao, Sugita, Yuji, Okamoto, Yuko
Publicado em 2010

Deciphering Supramolecular Structures with Protein-Protein Interaction Network Modeling

Por Tsuji, Toshiyuki, Yoda, Takao, Shirai, Tsuyoshi
Publicado no Sci Rep (2015)

GENESIS: a hybrid-parallel and multi-scale molecular dynamics simulator with enhanced sampling algorithms for biomolecular and cellular simulations

Por Jung, Jaewoon, Mori, Takaharu, Kobayashi, Chigusa, Matsunaga, Yasuhiro, Yoda, Takao, Feig, Michael, Sugita, Yuji
Publicado no Wiley Interdiscip Rev Comput Mol Sci (2015)

Exonuclease processivity of archaeal replicative DNA polymerase in association with PCNA is expedited by mismatches in DNA

Por Yoda, Takuya, Tanabe, Maiko, Tsuji, Toshiyuki, Yoda, Takao, Ishino, Sonoko, Shirai, Tsuyoshi, Ishino, Yoshizumi, Takeyama, Haruko, Nishida, Hirokazu
Publicado no Sci Rep (2017)