Transcript length bias in RNA-seq data confounds systems biology

Por Wakefield Matthew J, Oshlack Alicia
Publicado em 2009-04-01

Transcript length bias in RNA-seq data confounds systems biology

Por Oshlack, Alicia, Wakefield, Matthew J
Publicado em 2009

Marsupials and monotremes sort genome treasures from junk

Por Wakefield, Matthew J, Graves, Jennifer AM
Publicado em 2005

The kangaroo genome: Leaps and bounds in comparative genomics

Por Wakefield, Matthew J., Graves, Jennifer A. Marshall
Publicado em 2003

Vestige: Maximum likelihood phylogenetic footprinting

Por Wakefield, Matthew J, Maxwell, Peter, Huttley, Gavin A
Publicado em 2005

Gene ontology analysis for RNA-seq: accounting for selection bias

Por Young, Matthew D, Wakefield, Matthew J, Smyth, Gordon K, Oshlack, Alicia
Publicado em 2010

Histone underacetylation is an ancient component of mammalian X chromosome inactivation

Por Wakefield, Matthew J., Keohane, Ann M., Turner, Bryan M., Graves, Jennifer A. Marshall
Publicado em 1997

Genome-Wide Analysis of the Pho Regulon in a pstCA Mutant of Citrobacter rodentium

Por Cheng, Catherine, Wakefield, Matthew J., Yang, Ji, Tauschek, Marija, Robins-Browne, Roy M.
Publicado em 2012

PyEvolve: a toolkit for statistical modelling of molecular evolution

Por Butterfield, Andrew, Vedagiri, Vivek, Lang, Edward, Lawrence, Cath, Wakefield, Matthew J, Isaev, Alexander, Huttley, Gavin A
Publicado em 2004

Evolutionary dynamics of transposable elements in the short-tailed opossum Monodelphis domestica

Por Gentles, Andrew J., Wakefield, Matthew J., Kohany, Oleksiy, Gu, Wanjun, Batzer, Mark A., Pollock, David D., Jurka, Jerzy
Publicado em 2007

Isolation, X location and activity of the marsupial homologue of SLC16A2, an XIST-flanking gene in eutherian mammals

Por Koina, Edda, Wakefield, Matthew J., Walcher, Cristina, Disteche, Christine M., Whitehead, Siobhan, Ross, Mark, Marshall Graves, Jennifer A.
Publicado em 2005

Involvement of PatE, a Prophage-Encoded AraC-Like Regulator, in the Transcriptional Activation of Acid Resistance Pathways of Enterohemorrhagic Escherichia coli Strain EDL933

Por Bender, Jennifer K., Praszkier, Judyta, Wakefield, Matthew J., Holt, Kathryn, Tauschek, Marija, Robins-Browne, Roy M., Yang, Ji
Publicado em 2012

RegR Virulence Regulon of Rabbit-Specific Enteropathogenic Escherichia coli Strain E22

Por Srikhanta, Yogitha N., Hocking, Dianna M., Praszkier, Judyta, Wakefield, Matthew J., Robins-Browne, Roy M., Yang, Ji, Tauschek, Marija
Publicado em 2013

Control of Bacterial Virulence by the RalR Regulator of the Rabbit-Specific Enteropathogenic Escherichia coli Strain E22

Por Srikhanta, Yogitha N., Hocking, Dianna M., Wakefield, Matthew J., Higginson, Ellen, Robins-Browne, Roy M., Yang, Ji, Tauschek, Marija
Publicado em 2013

RegA, an AraC-Like Protein, Is a Global Transcriptional Regulator That Controls Virulence Gene Expression in Citrobacter rodentium

Por Hart, Emily, Yang, Ji, Tauschek, Marija, Kelly, Michelle, Wakefield, Matthew J., Frankel, Gad, Hartland, Elizabeth L., Robins-Browne, Roy M.
Publicado em 2008

ChIP-seq analysis reveals distinct H3K27me3 profiles that correlate with transcriptional activity

Por Young, Matthew D., Willson, Tracy A., Wakefield, Matthew J., Trounson, Evelyn, Hilton, Douglas J., Blewitt, Marnie E., Oshlack, Alicia, Majewski, Ian J.
Publicado em 2011

Influx mechanisms in the embryonic and adult rat choroid plexus: a transcriptome study

Por Saunders, Norman R., Dziegielewska, Katarzyna M., Møllgård, Kjeld, Habgood, Mark D., Wakefield, Matthew J., Lindsay, Helen, Stratzielle, Nathalie, Ghersi-Egea, Jean-Francois, Liddelow, Shane A.
Publicado no Front Neurosci (2015)

A second-generation anchored genetic linkage map of the tammar wallaby (<it>Macropus eugenii</it>)

Por Patel Hardip R, Wakefield Matthew J, Wei Ke-jun, Webley Lee, Wang Chenwei, Deakin Janine E, Alsop Amber, Marshall Graves Jennifer A, Cooper Desmond W, Nicholas Frank W, Zenger Kyall R
Publicado em 2011-08-01

A second-generation anchored genetic linkage map of the tammar wallaby (Macropus eugenii)

Por Wang, Chenwei, Webley, Lee, Wei, Ke-jun, Wakefield, Matthew J, Patel, Hardip R, Deakin, Janine E, Alsop, Amber, Marshall Graves, Jennifer A, Cooper, Desmond W, Nicholas, Frank W, Zenger, Kyall R
Publicado em 2011

Smchd1 regulates a subset of autosomal genes subject to monoallelic expression in addition to being critical for X inactivation

Por Mould, Arne W, Pang, Zhenyi, Pakusch, Miha, Tonks, Ian D, Stark, Mitchell, Carrie, Dianne, Mukhopadhyay, Pamela, Seidel, Annica, Ellis, Jonathan J, Deakin, Janine, Wakefield, Matthew J, Krause, Lutz, Blewitt, Marnie E, Kay, Graham F
Publicado em 2013