A 10-step guide to party conversation for bioinformaticians

od Oshlack, Alicia
Izdano 2013

DiffVar: a new method for detecting differential variability with application to methylation in cancer and aging

od Phipson, Belinda, Oshlack, Alicia
Izdano 2014

Clustering trees: a visualization for evaluating clusterings at multiple resolutions

od Zappia, Luke, Oshlack, Alicia
Izdano u Gigascience (2018)

Accuracy of short tandem repeats genotyping tools in whole exome sequencing data

od Halman, Andreas, Oshlack, Alicia
Izdano u F1000Res (2020)

Transcript length bias in RNA-seq data confounds systems biology

od Wakefield Matthew J, Oshlack Alicia
Izdano 2009-04-01

Transcript length bias in RNA-seq data confounds systems biology

od Oshlack, Alicia, Wakefield, Matthew J
Izdano 2009

A scaling normalization method for differential expression analysis of RNA-seq data

od Robinson, Mark D, Oshlack, Alicia
Izdano 2010

Corset: enabling differential gene expression analysis for de novo assembled transcriptomes

od Davidson, Nadia M, Oshlack, Alicia
Izdano 2014

Necklace: combining reference and assembled transcriptomes for more comprehensive RNA-Seq analysis

od Davidson, Nadia M, Oshlack, Alicia
Izdano u Gigascience (2018)

Bazam: a rapid method for read extraction and realignment of high-throughput sequencing data

od Sadedin, Simon P., Oshlack, Alicia
Izdano u Genome Biol (2019)

Segmental Duplications Contribute to Gene Expression Differences Between Humans and Chimpanzees

od Blekhman, Ran, Oshlack, Alicia, Gilad, Yoav
Izdano 2009

SWAN: Subset-quantile Within Array Normalization for Illumina Infinium HumanMethylation450 BeadChips

od Maksimovic, Jovana, Gordon, Lavinia, Oshlack, Alicia
Izdano 2012

A cross-package Bioconductor workflow for analysing methylation array data

od Maksimovic, Jovana, Phipson, Belinda, Oshlack, Alicia
Izdano u F1000Res (2017)

Gene length and detection bias in single cell RNA sequencing protocols

od Phipson, Belinda, Zappia, Luke, Oshlack, Alicia
Izdano u F1000Res (2017)

Splatter: simulation of single-cell RNA sequencing data

od Zappia, Luke, Phipson, Belinda, Oshlack, Alicia
Izdano u Genome Biol (2017)

Exploring the single-cell RNA-seq analysis landscape with the scRNA-tools database

od Zappia, Luke, Phipson, Belinda, Oshlack, Alicia
Izdano u PLoS Comput Biol (2018)

Gene set enrichment analysis for genome-wide DNA methylation data

od Maksimovic, Jovana, Oshlack, Alicia, Phipson, Belinda
Izdano u Genome Biol (2021)

Optimizing the noise versus bias trade-off for Illumina whole genome expression BeadChips

od Shi, Wei, Oshlack, Alicia, Smyth, Gordon K.
Izdano 2010

miRNA-Seq normalization comparisons need improvement

od Zhou, Xiaobei, Oshlack, Alicia, Robinson, Mark D.
Izdano 2013

Using equivalence class counts for fast and accurate testing of differential transcript usage

od Cmero, Marek, Davidson, Nadia M., Oshlack, Alicia
Izdano u F1000Res (2019)