Reversed-phase liquid chromatography coupled on-line to estrogen receptor bioaffinity detection based on fluorescence polarization

od Reinen, Jelle, Kool, Jeroen, Vermeulen, Nico P. E.
Izdano 2008

Involvement of the Pleiotropic Drug Resistance Response, Protein Kinase C Signaling, and Altered Zinc Homeostasis in Resistance of Saccharomyces cerevisiae to Diclofenac

od van Leeuwen, Jolanda S., Vermeulen, Nico P. E., Vos, J. Chris
Izdano 2011

Characterization of human cytochrome P450 mediated bioactivation of amodiaquine and its major metabolite N‐desethylamodiaquine

od Zhang, Yongjie, Vermeulen, Nico P. E., Commandeur, Jan N. M.
izdano v Br J Clin Pharmacol (2016)

Binding free energy predictions of farnesoid X receptor (FXR) agonists using a linear interaction energy (LIE) approach with reliability estimation: application to the D3R Grand Ch...

od Rifai, Eko Aditya, van Dijk, Marc, Vermeulen, Nico P. E., Geerke, Daan P.
izdano v J Comput Aided Mol Des (2017)

Characterization of kinetics of human cytochrome P450s involved in bioactivation of flucloxacillin: inhibition of CYP3A‐catalysed hydroxylation by sulfaphenazole

od Dekker, Stefan J, Dohmen, Floor, Vermeulen, Nico P E, Commandeur, Jan N M
izdano v Br J Pharmacol (2018)

A Comparative Linear Interaction Energy and MM/PBSA Study on SIRT1–Ligand Binding Free Energy Calculation

od Rifai, Eko Aditya, van Dijk, Marc, Vermeulen, Nico P. E., Yanuar, Arry, Geerke, Daan P.
izdano v J Chem Inf Model (2019)

Role of residue 87 in substrate selectivity and regioselectivity of drug-metabolizing cytochrome P450 CYP102A1 M11

od Vottero, Eduardo, Rea, Vanina, Lastdrager, Jeroen, Honing, Maarten, Vermeulen, Nico P. E., Commandeur, Jan N. M.
Izdano 2011

Enantioselective Substrate Binding in a Monooxygenase Protein Model by Molecular Dynamics and Docking

od Feenstra, K. Anton, Hofstetter, Karin, Bosch, Rolien, Schmid, Andreas, Commandeur, Jan N. M., Vermeulen, Nico P. E.
Izdano 2006

Combining substrate dynamics, binding statistics, and energy barriers to rationalize regioselective hydroxylation of octane and lauric acid by CYP102A1 and mutants

od Feenstra, K. Anton, Starikov, Eugene B., Urlacher, Vlada B., Commandeur, Jan N.M., Vermeulen, Nico P.E.
Izdano 2007

Acetaminophen reduces the protein levels of high affinity amino acid permeases and causes tryptophan depletion

od Huseinovic, Angelina, Dekker, Stefan J., Boogaard, Bob, Vermeulen, Nico. P. E., Kooter, Jan M., Vos, J. Chris
izdano v Amino Acids (2018)

Improving the iterative Linear Interaction Energy approach using automated recognition of configurational transitions

od Vosmeer, C. Ruben, Kooi, Derk P., Capoferri, Luigi, Terpstra, Margreet M., Vermeulen, Nico P. E., Geerke, Daan. P.
izdano v J Mol Model (2016)

Towards Automated Binding Affinity Prediction Using an Iterative Linear Interaction Energy Approach

od Vosmeer, C. Ruben, Pool, René, van Stee, Mariël F., Perić-Hassler, Lovorka, Vermeulen, Nico P. E., Geerke, Daan P.
Izdano 2014

Comprehensive and Automated Linear Interaction Energy Based Binding-Affinity Prediction for Multifarious Cytochrome P450 Aromatase Inhibitors

od van Dijk, Marc, ter Laak, Antonius M., Wichard, Jörg D., Capoferri, Luigi, Vermeulen, Nico P. E., Geerke, Daan P.
izdano v J Chem Inf Model (2017)

An on-line post-column detection system for the detection of reactive-oxygen-species-producing compounds and antioxidants in mixtures

od Kool, Jeroen, Van Liempd, Sebastiaan M., Harmsen, Stefan, Schenk, Tim, Irth, Hubertus, Commandeur, Jan N. M., Vermeulen, Nico P. E.
Izdano 2007

Application of a cocktail approach to screen cytochrome P450 BM3 libraries for metabolic activity and diversity

od Reinen, Jelle, Postma, Geert, Tump, Cornelis, Bloemberg, Tom, Engel, Jasper, Vermeulen, Nico P. E., Commandeur, Jan N. M., Honing, Maarten
izdano v Anal Bioanal Chem (2016)

Linear Interaction Energy Based Prediction of Cytochrome P450 1A2 Binding Affinities with Reliability Estimation

od Capoferri, Luigi, Verkade-Vreeker, Marlies C. A., Buitenhuis, Danny, Commandeur, Jan N. M., Pastor, Manuel, Vermeulen, Nico P. E., Geerke, Daan P.
izdano v PLoS One (2015)

Human multidrug resistance protein 4 (MRP4) is a cellular efflux transporter for paracetamol glutathione and cysteine conjugates

od Koenderink, Jan B., van den Heuvel, Jeroen J. M. W., Bilos, Ab, Vredenburg, Galvin, Vermeulen, Nico P. E., Russel, Frans G. M.
izdano v Arch Toxicol (2020)

Free energies of binding of R- and S-propranolol to wild-type and F483A mutant cytochrome P450 2D6 from molecular dynamics simulations

od de Graaf, Chris, Oostenbrink, Chris, Keizers, Peter H. J., van Vugt-Lussenburg, Barbara M. A., Commandeur, Jan N. M., Vermeulen, Nico P. E.
Izdano 2007

The effect of acetaminophen on ubiquitin homeostasis in Saccharomyces cerevisiae

od Huseinovic, Angelina, van Leeuwen, Jolanda S., van Welsem, Tibor, Stulemeijer, Iris, van Leeuwen, Fred, Vermeulen, Nico P. E., Kooter, Jan M., Vos, J. Chris
izdano v PLoS One (2017)

eTOX ALLIES: an automated pipeLine for linear interaction energy-based simulations

od Capoferri, Luigi, van Dijk, Marc, Rustenburg, Ariën S., Wassenaar, Tsjerk A., Kooi, Derk P., Rifai, Eko A., Vermeulen, Nico P. E., Geerke, Daan P.
izdano v J Cheminform (2017)