Electrostatic similarity of proteins: Application of three dimensional spherical harmonic decomposition

Por Długosz, Maciej, Trylska, Joanna
Publicado em 2008

Search for novel aminoglycosides by combining fragment-based virtual screening and 3D-QSAR scoring

Por Setny, Piotr, Trylska, Joanna
Publicado em 2009

Diffusion in crowded biological environments: applications of Brownian dynamics

Por Długosz, Maciej, Trylska, Joanna
Publicado em 2011

RedMDStream: Parameterization and Simulation Toolbox for Coarse-Grained Molecular Dynamics Models

Por Leonarski, Filip, Trylska, Joanna
Publicado no Biophys J (2015)

Extracellular loops of BtuB facilitate transport of vitamin B(12) through the outer membrane of E. coli

Por Pieńko, Tomasz, Trylska, Joanna
Publicado no PLoS Comput Biol (2020)

The Poisson-Boltzmann model for tRNA: Assessment of the calculation set-up and ionic concentration cutoff

Por Gruziel, Magdalena, Grochowski, Pawel, Trylska, Joanna
Publicado em 2008

Molecular dynamics study of the ribosomal A-site

Por Romanowska, Julia, Setny, Piotr, Trylska, Joanna
Publicado em 2008

Molecular dynamics of ribosomal elongation factors G and Tu

Por Kulczycka, Katarzyna, Długosz, Maciej, Trylska, Joanna
Publicado em 2010

Interplay of the Bacterial Ribosomal A-Site, S12 Protein Mutations and Paromomycin Binding: A Molecular Dynamics Study

Por Panecka, Joanna, Mura, Cameron, Trylska, Joanna
Publicado no PLoS One (2014)

MINT: software to identify motifs and short-range interactions in trajectories of nucleic acids

Por Górska, Anna, Jasiński, Maciej, Trylska, Joanna
Publicado no Nucleic Acids Res (2015)

Enzymatic activity of human immunodeficiency virus type 1 protease in crowded solutions

Por Maximova, Ksenia, Wojtczak, Jakub, Trylska, Joanna
Publicado no Eur Biophys J (2019)

Modeling Crowded Environment in Molecular Simulations

Por Ostrowska, Natalia, Feig, Michael, Trylska, Joanna
Publicado no Front Mol Biosci (2019)

Conformational Changes of Anoplin, W-MreB(1–9), and (KFF)(3)K Peptides near the Membranes

Por Wojciechowska, Monika, Miszkiewicz, Joanna, Trylska, Joanna
Publicado no Int J Mol Sci (2020)

Association of aminoglycosidic antibiotics with the ribosomal A-site studied with Brownian dynamics

Por Długosz, Maciej, Antosiewicz, Jan M., Trylska, Joanna
Publicado em 2008

pH-Dependent Association of Proteins. The Test Case of Monoclonal Antibody HyHEL-5 and its Antigen Hen Egg White Lysozyme

Por Długosz, Maciej, Antosiewicz, Jan M., Trylska, Joanna
Publicado em 2009

Quantum mechanical studies of lincosamides

Por Kulczycka-Mierzejewska, Katarzyna, Trylska, Joanna, Sadlej, Joanna
Publicado em 2011

Molecular dynamics simulations suggest why the A2058G mutation in 23S RNA results in bacterial resistance against clindamycin

Por Kulczycka-Mierzejewska, Katarzyna, Sadlej, Joanna, Trylska, Joanna
Publicado no J Mol Model (2018)

Molecular dynamics simulations of the first steps of the reaction catalyzed by HIV-1 protease.

Por Trylska, Joanna, Bała, Piotr, Geller, Maciej, Grochowski, Paweł
Publicado em 2002

Dependency Map of Proteins in the Small Ribosomal Subunit

Por Hamacher, Kay, Trylska, Joanna, McCammon, J. Andrew
Publicado em 2006

Exploring Global Motions and Correlations in the Ribosome

Por Trylska, Joanna, Tozzini, Valentina, McCammon, J. Andrew
Publicado em 2005