An adaptable method using human mixed tissue ratiometric controls for benchmarking performance on gene expression microarrays in clinical laboratories

由 Pine, P Scott, Rosenzweig, Barry A, Thompson, Karol L
出版 2011

Development of methods for data quantitation of spiked salmon host cell DNA in protamine sulfate by qPCR

由 Sommers, Cynthia, Rosenzweig, Barry, Oum, Lida, Thompson, Karol, Keire, David A.
發表在 Data Brief (2018)

Characterization of the effect of sample quality on high density oligonucleotide microarray data using progressively degraded rat liver RNA

由 Thompson, Karol L, Pine, P Scott, Rosenzweig, Barry A, Turpaz, Yaron, Retief, Jacques
出版 2007

Workgroup Report: Review of Genomics Data Based on Experience with Mock Submissions—View of the CDER Pharmacology Toxicology Nonclinical Pharmacogenomics Subcommittee

由 Leighton, John K., Brown, Paul, Ellis, Amy, Harlow, Patricia, Harrouk, Wafa, Pine, P. Scott, Robison, Timothy, Rosario, Lilliam, Thompson, Karol
出版 2006

Improvement in the Reproducibility and Accuracy of DNA Microarray Quantification by Optimizing Hybridization Conditions

由 Han, Tao, Melvin, Cathy D, Shi, Leming, Branham, William S, Moland, Carrie L, Pine, P Scott, Thompson, Karol L, Fuscoe, James C
出版 2006

Comparison of Kidney Injury Molecule-1 and Other Nephrotoxicity Biomarkers in Urine and Kidney Following Acute Exposure to Gentamicin, Mercury, and Chromium

由 Zhou, Yuzhao, Vaidya, Vishal S., Brown, Ronald P., Zhang, Jun, Rosenzweig, Barry A., Thompson, Karol L., Miller, Terry J., Bonventre, Joseph V., Goering, Peter L.
出版 2007

The Utility of a Rodent Model in Detecting Pediatric Drug-Induced Nephrotoxicity

由 Espandiari, Parvaneh, Zhang, Jun, Rosenzweig, Barry A., Vaidya, Vishal S., Sun, Jinchun, Schnackenberg, Laura, Herman, Eugene H., Knapton, Alan, Bonventre, Joseph V., Beger, Richard D., Thompson, Karol L., Hanig, Joseph
出版 2007

Two approaches for estimating the lower limit of quantitation (LLOQ) of microRNA levels assayed as exploratory biomarkers by RT-qPCR

由 Wolfinger, Russell D., Beedanagari, Sudheer, Boitier, Eric, Chen, Tao, Couttet, Philippe, Ellinger-Ziegelbauer, Heidrun, Guillemain, Gregory, Mariet, Claire, Mouritzen, Peter, O’Lone, Raegan, Pine, P. Scott, Sharapova, Tatiana, Yan, Jian, Yuen, Peter S., Thompson, Karol L.
發表在 BMC Biotechnol (2018)

Identification of platform-independent gene expression markers of cisplatin nephrotoxicity.

由 Thompson, Karol L, Afshari, Cynthia A, Amin, Rupesh P, Bertram, Timothy A, Car, Bruce, Cunningham, Michael, Kind, Clive, Kramer, Jeffrey A, Lawton, Michael, Mirsky, Michael, Naciff, Jorge M, Oreffo, Victor, Pine, P Scott, Sistare, Frank D
出版 2004

Sources of variation in baseline gene expression levels from toxicogenomics study control animals across multiple laboratories

由 Boedigheimer, Michael J, Wolfinger, Russell D, Bass, Michael B, Bushel, Pierre R, Chou, Jeff W, Cooper, Matthew, Corton, J Christopher, Fostel, Jennifer, Hester, Susan, Lee, Janice S, Liu, Fenglong, Liu, Jie, Qian, Hui-Rong, Quackenbush, John, Pettit, Syril, Thompson, Karol L
出版 2008

Non-Lethal Endotoxin Injection: A Rat Model of Hypercoagulability

由 Brooks, Marjory B., Turk, James R., Guerrero, Abraham, Narayanan, Padma K., Nolan, John P., Besteman, Elizabeth G., Wilson, Dennis W., Thomas, Roberta A., Fishman, Cindy E., Thompson, Karol L., Ellinger-Ziegelbauer, Heidrun, Pierson, Jennifer B., Paulman, April, Chiang, Alan Y., Schultze, Albert E.
發表在 PLoS One (2017)

Overview on the application of transcription profiling using selected nephrotoxicants for toxicology assessment.

由 Kramer, Jeffrey A, Pettit, Syril D, Amin, Rupesh P, Bertram, Timothy A, Car, Bruce, Cunningham, Michael, Curtiss, Sandra W, Davis, John W, Kind, Clive, Lawton, Michael, Naciff, Jorge M, Oreffo, Victor, Roman, Richard J, Sistare, Frank D, Stevens, James, Thompson, Karol, Vickers, Alison E, Wild, Stacey, Afshari, Cynthia A
出版 2004

Identification of putative gene based markers of renal toxicity.

由 Amin, Rupesh P, Vickers, Alison E, Sistare, Frank, Thompson, Karol L, Roman, Richard J, Lawton, Michael, Kramer, Jeffrey, Hamadeh, Hisham K, Collins, Jennifer, Grissom, Sherry, Bennett, Lee, Tucker, C Jeffrey, Wild, Stacie, Kind, Clive, Oreffo, Victor, Davis, John W, Curtiss, Sandra, Naciff, Jorge M, Cunningham, Michael, Tennant, Raymond, Stevens, James, Car, Bruce, Bertram, Timothy A, Afshari, Cynthia A
出版 2004

Use of a mixed tissue RNA design for performance assessments on multiple microarray formats

由 Thompson, Karol L., Rosenzweig, Barry A., Pine, P. Scott, Retief, Jacques, Turpaz, Yaron, Afshari, Cynthia A., Hamadeh, Hisham K., Damore, Michael A., Boedigheimer, Michael, Blomme, Eric, Ciurlionis, Rita, Waring, Jeffrey F., Fuscoe, James C., Paules, Richard, Tucker, Charles J., Fare, Thomas, Coffey, Ernest M., He, Yudong, Collins, Patrick J., Jarnagin, Kurt, Fujimoto, Susan, Ganter, Brigitte, Kiser, Gretchen, Kaysser-Kranich, Tamma, Sina, Joseph, Sistare, Frank D.
出版 2005

Summarizing performance for genome scale measurement of miRNA: reference samples and metrics

由 Pine, P. Scott, Lund, Steven P., Parsons, Jerod R., Vang, Lindsay K., Mahabal, Ashish A., Cinquini, Luca, Kelly, Sean C., Kincaid, Heather, Crichton, Daniel J., Spira, Avrum, Liu, Gang, Gower, Adam C., Pass, Harvey I., Goparaju, Chandra, Dubinett, Steven M., Krysan, Kostyantyn, Stass, Sanford A., Kukuruga, Debra, Van Keuren-Jensen, Kendall, Courtright-Lim, Amanda, Thompson, Karol L., Rosenzweig, Barry A., Sorbara, Lynn, Srivastava, Sudhir, Salit, Marc L.
發表在 BMC Genomics (2018)