Binding Motifs in Bacterial Gene Promoters Modulate Transcriptional Effects of Global Regulators CRP and ArcA

بواسطة Leuze, Michael R., Karpinets, Tatiana V., Syed, Mustafa H., Beliaev, Alexander S., Uberbacher, Edward C.
منشور في 2012

PUMA2—grid-based high-throughput analysis of genomes and metabolic pathways

بواسطة Maltsev, Natalia, Glass, Elizabeth, Sulakhe, Dinanath, Rodriguez, Alexis, Syed, Mustafa H., Bompada, Tanuja, Zhang, Yi, D'Souza, Mark
منشور في 2006

Sentra: a database of signal transduction proteins for comparative genome analysis

بواسطة D'Souza, Mark, Glass, Elizabeth M., Syed, Mustafa H., Zhang, Yi, Rodriguez, Alexis, Maltsev, Natalia, Galperin, Michael Y.
منشور في 2007

Shewregdb: Database and visualization environment for experimental and predicted regulatory information in Shewanella oneidensis mr-1

بواسطة Syed, Mustafa H, Karpinets, Tatiana V, Leuze, Michael R, Kora, Guruprasad H, Romine, Margaret R, Uberbacher, Edward C
منشور في 2009

LacI Transcriptional Regulatory Networks in Clostridium thermocellum DSM1313

بواسطة Wilson, Charlotte M., Klingeman, Dawn M., Schlachter, Caleb, Syed, Mustafa H., Wu, Chia-wei, Guss, Adam M., Brown, Steven D.
الحاوية / القاعدة Appl Environ Microbiol (2017)

Industrial Robustness: Understanding the Mechanism of Tolerance for the Populus Hydrolysate-Tolerant Mutant Strain of Clostridium thermocellum

بواسطة Linville, Jessica L., Rodriguez, Miguel, Land, Miriam, Syed, Mustafa H., Engle, Nancy L., Tschaplinski, Timothy J., Mielenz, Jonathan R., Cox, Chris D.
منشور في 2013

Baseline VDJ clonotype detection using a targeted sequencing NGS assay: allowing for subsequent MRD assessment

بواسطة Hultcrantz, Malin, Rustad, Even Holth, Yellapantula, Venkata, Arcila, Maria, Ho, Caleb, Syed, Mustafa H., Papaemmanuil, Elli, Zhang, Yanming, Maura, Francesco, Landgren, Ola
الحاوية / القاعدة Blood Cancer J (2020)

BESC knowledgebase public portal

بواسطة Syed, Mustafa H., Karpinets, Tatiana V., Parang, Morey, Leuze, Michael R., Park, Byung H., Hyatt, Doug, Brown, Steven D., Moulton, Steve, Galloway, Michael D., Uberbacher, Edward C.
منشور في 2012

Shewanella knowledgebase: integration of the experimental data and computational predictions suggests a biological role for transcription of intergenic regions

بواسطة Karpinets, Tatiana V., Romine, Margaret F., Schmoyer, Denise D., Kora, Guruprasad H., Syed, Mustafa H., Leuze, Michael R., Serres, Margrethe H., Park, Byung H., Samatova, Nagiza F., Uberbacher, Edward C.
منشور في 2010

Clonally-Related CD5+ CLL/SLL and CD10+ high grade B-cell lymphoma suggests common neoplastic progenitor with branched disease evolution, with therapeutic implications

بواسطة Kumar, Priyadarshini, Uppal, Manik, Xiao, Wenbin, Dogan, Ahmet, Roshal, Mikhail, Gao, Qi, Aypar, Umut, Zhang, Yanming, Arcila, Maria E., Moung, Christine, Yao, Jinjuan, Nafa, Khedoudja, Yu, Wayne, Syed, Mustafa H., Park, Jae, Kumar, Anita, Ho, Caleb
الحاوية / القاعدة Leuk Lymphoma (2019)

Global transcriptome analysis of Clostridium thermocellum ATCC 27405 during growth on dilute acid pretreated Populus and switchgrass

بواسطة Wilson, Charlotte M, Rodriguez, Miguel, Johnson, Courtney M, Martin, Stanton L, Chu, Tzu Ming, Wolfinger, Russ D, Hauser, Loren J, Land, Miriam L, Klingeman, Dawn M, Syed, Mustafa H, Ragauskas, Arthur J, Tschaplinski, Timothy J, Mielenz, Jonathan R, Brown, Steven D
منشور في 2013

KBase: The United States Department of Energy Systems Biology Knowledgebase

بواسطة Arkin, Adam P, Cottingham, Robert W, Henry, Christopher S, Harris, Nomi L, Stevens, Rick L, Maslov, Sergei, Dehal, Paramvir, Ware, Doreen, Perez, Fernando, Canon, Shane, Sneddon, Michael W, Henderson, Matthew L, Riehl, William J, Murphy-Olson, Dan, Chan, Stephen Y, Kamimura, Roy T, Kumari, Sunita, Drake, Meghan M, Brettin, Thomas S, Glass, Elizabeth M, Chivian, Dylan, Gunter, Dan, Weston, David J, Allen, Benjamin H, Baumohl, Jason, Best, Aaron A, Bowen, Ben, Brenner, Steven E, Bun, Christopher C, Chandonia, John-Marc, Chia, Jer-Ming, Colasanti, Ric, Conrad, Neal, Davis, James J, Davison, Brian H, DeJongh, Matthew, Devoid, Scott, Dietrich, Emily, Dubchak, Inna, Edirisinghe, Janaka N, Fang, Gang, Faria, José P, Frybarger, Paul M, Gerlach, Wolfgang, Gerstein, Mark, Greiner, Annette, Gurtowski, James, Haun, Holly L, He, Fei, Jain, Rashmi, Joachimiak, Marcin P, Keegan, Kevin P, Kondo, Shinnosuke, Kumar, Vivek, Land, Miriam L, Meyer, Folker, Mills, Marissa, Novichkov, Pavel S, Oh, Taeyun, Olsen, Gary J, Olson, Robert, Parrello, Bruce, Pasternak, Shiran, Pearson, Erik, Poon, Sarah S, Price, Gavin A, Ramakrishnan, Srividya, Ranjan, Priya, Ronald, Pamela C, Schatz, Michael C, Seaver, Samuel M D, Shukla, Maulik, Sutormin, Roman A, Syed, Mustafa H, Thomason, James, Tintle, Nathan L, Wang, Daifeng, Xia, Fangfang, Yoo, Hyunseung, Yoo, Shinjae, Yu, Dantong
الحاوية / القاعدة Nat Biotechnol (2018)

Mutational Landscape of Metastatic Cancer Revealed from Prospective Clinical Sequencing of 10,000 Patients

بواسطة Zehir, Ahmet, Benayed, Ryma, Shah, Ronak H., Syed, Aijazuddin, Middha, Sumit, Kim, Hyunjae R., Srinivasan, Preethi, Gao, Jianjiong, Chakravarty, Debyani, Devlin, Sean M., Hellmann, Matthew D., Barron, David A., Schram, Alison M., Hameed, Meera, Dogan, Snjezana, Ross, Dara S., Hechtman, Jaclyn F., DeLair, Deborah F., Yao, JinJuan, Mandelker, Diana L., Cheng, Donavan T., Chandramohan, Raghu, Mohanty, Abhinita S., Ptashkin, Ryan N., Jayakumaran, Gowtham, Prasad, Meera, Syed, Mustafa H., Rema, Anoop Balakrishnan, Liu, Zhen Y., Nafa, Khedoudja, Borsu, Laetitia, Sadowska, Justyna, Casanova, Jacklyn, Bacares, Ruben, Kiecka, Iwona J., Razumova, Anna, Son, Julie B., Stewart, Lisa, Baldi, Tessara, Mullaney, Kerry A., Al-Ahmadie, Hikmat, Vakiani, Efsevia, Abeshouse, Adam A., Penson, Alexander V., Jonsson, Philip, Camacho, Niedzica, Chang, Matthew T., Won, Helen H., Gross, Benjamin E., Kundra, Ritika, Heins, Zachary J., Chen, Hsiao-Wei, Phillips, Sarah, Zhang, Hongxin, Wang, Jiaojiao, Ochoa, Angelica, Wills, Jonathan, Eubank, Michael, Thomas, Stacy B., Gardos, Stuart M., Reales, Dalicia N., Galle, Jesse, Durany, Robert, Cambria, Roy, Abida, Wassim, Cercek, Andrea, Feldman, Darren R., Gounder, Mrinal M., Hakimi, A. Ari, Harding, James J., Iyer, Gopa, Janjigian, Yelena Y., Jordan, Emmet J., Kelly, Ciara M., Lowery, Maeve A., Morris, Luc G.T., Omuro, Antonio M., Raj, Nitya, Razavi, Pedram, Shoushtari, Alexander N., Shukla, Neerav, Soumerai, Tara E., Varghese, Anna M., Yaeger, Rona, Coleman, Jonathan, Bochner, Bernard, Riely, Gregory J., Saltz, Leonard B., Scher, Howard I., Sabbatini, Paul J., Robson, Mark E., Klimstra, David S., Taylor, Barry S., Baselga, Jose, Schultz, Nikolaus, Hyman, David M., Arcila, Maria E., Solit, David B., Ladanyi, Marc, Berger, Michael F.
الحاوية / القاعدة Nat Med (2017)