Meta-analysis of RNA-seq expression data across species, tissues and studies

Por Sudmant, Peter H., Alexis, Maria S., Burge, Christopher B.
Publicado no Genome Biol (2015)

MIPSTR: a method for multiplex genotyping of germline and somatic STR variation across many individuals

Por Carlson, Keisha D., Sudmant, Peter H., Press, Maximilian O., Eichler, Evan E., Shendure, Jay, Queitsch, Christine
Publicado no Genome Res (2015)

Corrigendum: MIPSTR: a method for multiplex genotyping of germline and somatic STR variation across many individuals

Por Carlson, Keisha D., Sudmant, Peter H., Press, Maximilian O., Eichler, Evan E., Shendure, Jay, Queitsch, Christine
Publicado no Genome Res (2015)

The Role of the Antiviral APOBEC3 Gene Family in Protecting Chimpanzees against Lentiviruses from Monkeys

Por Etienne, Lucie, Bibollet-Ruche, Frederic, Sudmant, Peter H., Wu, Lily I., Hahn, Beatrice H., Emerman, Michael
Publicado no PLoS Pathog (2015)

A quantitative model of the initiation of DNA replication in Saccharomyces cerevisiae predicts the effects of system perturbations

Por Gidvani, Rohan D, Sudmant, Peter, Li, Grace, DaSilva, Lance F, McConkey, Brendan J, Duncker, Bernard P, Ingalls, Brian P
Publicado em 2012

RNA sequence context effects measured in vitro predict in vivo protein binding and regulation

Por Taliaferro, J. Matthew, Lambert, Nicole J., Sudmant, Peter H., Dominguez, Daniel, Merkin, Jason J., Alexis, Maria S., Bazile, Cassandra, Burge, Christopher B.
Publicado no Mol Cell (2016)

Diversity of Human Copy Number Variation and Multicopy Genes

Por Sudmant, Peter H., Kitzman, Jacob O., Antonacci, Francesca, Alkan, Can, Malig, Maika, Tsalenko, Anya, Sampas, Nick, Bruhn, Laurakay, Shendure, Jay, Eichler, Evan E.
Publicado em 2010

The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2

Por Ventura, Mario, Catacchio, Claudia R., Sajjadian, Saba, Vives, Laura, Sudmant, Peter H., Marques-Bonet, Tomas, Graves, Tina A., Wilson, Richard K., Eichler, Evan E.
Publicado em 2012

Corrigendum: The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2

Por Ventura, Mario, Catacchio, Claudia R., Sajjadian, Saba, Vives, Laura, Sudmant, Peter H., Marques-Bonet, Tomas, Graves, Tina A., Wilson, Richard K., Eichler, Evan E.
Publicado no Genome Res (2017)

Copy number variation detection and genotyping from exome sequence data

Por Krumm, Niklas, Sudmant, Peter H., Ko, Arthur, O'Roak, Brian J., Malig, Maika, Coe, Bradley P., Quinlan, Aaron R., Nickerson, Deborah A., Eichler, Evan E.
Publicado em 2012

Population-Genetic Properties of Differentiated Human Copy-Number Polymorphisms

Por Campbell, Catarina D., Sampas, Nick, Tsalenko, Anya, Sudmant, Peter H., Kidd, Jeffrey M., Malig, Maika, Vu, Tiffany H., Vives, Laura, Tsang, Peter, Bruhn, Laurakay, Eichler, Evan E.
Publicado em 2011

Haplotype-resolved genome sequencing of a Gujarati Indian individual

Por Kitzman, Jacob O, MacKenzie, Alexandra P, Adey, Andrew, Hiatt, Joseph B, Patwardhan, Rupali P, Sudmant, Peter H, Ng, Sarah B, Alkan, Can, Qiu, Ruolan, Eichler, Evan E, Shendure, Jay
Publicado em 2010

Estimating human mutation rate using autozygosity in a founder population

Por Campbell, Catarina D., Chong, Jessica X., Malig, Maika, Ko, Arthur, Dumont, Beth L., Han, Lide, Vives, Laura, O’Roak, Brian J., Sudmant, Peter H., Shendure, Jay, Abney, Mark, Ober, Carole, Eichler, Evan E.
Publicado em 2012

Reconstructing complex regions of genomes using long-read sequencing technology

Por Huddleston, John, Ranade, Swati, Malig, Maika, Antonacci, Francesca, Chaisson, Mark, Hon, Lawrence, Sudmant, Peter H., Graves, Tina A., Alkan, Can, Dennis, Megan Y., Wilson, Richard K., Turner, Stephen W., Korlach, Jonas, Eichler, Evan E.
Publicado em 2014

Evolution and diversity of copy number variation in the great ape lineage

Por Sudmant, Peter H., Huddleston, John, Catacchio, Claudia R., Malig, Maika, Hillier, LaDeana W., Baker, Carl, Mohajeri, Kiana, Kondova, Ivanela, Bontrop, Ronald E., Persengiev, Stephan, Antonacci, Francesca, Ventura, Mario, Prado-Martinez, Javier, Marques-Bonet, Tomas, Eichler, Evan E.
Publicado em 2013

Resolving the complexity of the human genome using single-molecule sequencing

Por Chaisson, Mark J.P., Huddleston, John, Dennis, Megan Y., Sudmant, Peter H., Malig, Maika, Hormozdiari, Fereydoun, Antonacci, Francesca, Surti, Urvashi, Sandstrom, Richard, Boitano, Matthew, Landolin, Jane M., Stamatoyannopoulos, John A., Hunkapiller, Michael W., Korlach, Jonas, Eichler, Evan E.
Publicado no Nature (2014)

Human-specific evolution of novel SRGAP2 genes by incomplete segmental duplication

Por Dennis, Megan Y., Nuttle, Xander, Sudmant, Peter H., Antonacci, Francesca, Graves, Tina A., Nefedov, Mikhail, Rosenfeld, Jill A., Sajjadian, Saba, Malig, Maika, Kotkiewicz, Holland, Curry, Cynthia J., Shafer, Susan, Shaffer, Lisa G., de Jong, Pieter J., Wilson, Richard K., Eichler, Evan E.
Publicado em 2012

Palindromic GOLGA8 core duplicons promote chromosome 15q13.3 microdeletion and evolutionary instability

Por Antonacci, Francesca, Dennis, Megan Y., Huddleston, John, Sudmant, Peter H., Steinberg, Karyn Meltz, Rosenfeld, Jill A., Miroballo, Mattia, Graves, Tina A., Vives, Laura, Malig, Maika, Denman, Laura, Raja, Archana, Stuart, Andrew, Tang, Joyce, Munson, Brenton, Shaffer, Lisa G., Amemiya, Chris T., Wilson, Richard K., Eichler, Evan E.
Publicado no Nat Genet (2014)

Structural Diversity and African Origin of the 17q21.31 Inversion Polymorphism

Por Steinberg, Karyn Meltz, Antonacci, Francesca, Sudmant, Peter H., Kidd, Jeffrey M., Campbell, Catarina D., Vives, Laura, Malig, Maika, Scheinfeldt, Laura, Beggs, William, Ibrahim, Muntaser, Lema, Godfrey, Nyambo, Thomas B., Omar, Sabah A., Bodo, Jean-Marie, Froment, Alain, Donnelly, Michael P., Kidd, Kenneth K., Tishkoff, Sarah A., Eichler, Evan E.
Publicado em 2012

Rates and patterns of great ape retrotransposition

Por Hormozdiari, Fereydoun, Konkel, Miriam K., Prado-Martinez, Javier, Chiatante, Giorgia, Herraez, Irene Hernando, Walker, Jerilyn A., Nelson, Benjamin, Alkan, Can, Sudmant, Peter H., Huddleston, John, Catacchio, Claudia R., Ko, Arthur, Malig, Maika, Baker, Carl, Genome Project, Great Ape, Marques-Bonet, Tomas, Ventura, Mario, Batzer, Mark A., Eichler, Evan E.
Publicado em 2013