SeqPlots - Interactive software for exploratory data analyses, pattern discovery and visualization in genomics

מאת Stempor, Przemyslaw, Ahringer, Julie
הוצא לאור ב Wellcome Open Res (2016)

MMpred: functional miRNA – mRNA interaction analyses by miRNA expression prediction

מאת Stempor, Przemyslaw A, Cauchi, Michael, Wilson, Paul
יצא לאור 2012

Interactions and Feedbacks in E-Cadherin Transcriptional Regulation

מאת Ramirez Moreno, Miguel, Stempor, Przemyslaw A., Bulgakova, Natalia A.
הוצא לאור ב Front Cell Dev Biol (2021)

An Alternative STAT Signaling Pathway Acts in Viral Immunity in Caenorhabditis elegans

מאת Tanguy, Mélanie, Véron, Louise, Stempor, Przemyslaw, Ahringer, Julie, Sarkies, Peter, Miska, Eric A.
הוצא לאור ב mBio (2017)

The Caenorhabditis elegans homolog of the Evi1 proto-oncogene, egl-43, coordinates G1 cell cycle arrest with pro-invasive gene expression during anchor cell invasion

מאת Deng, Ting, Stempor, Przemyslaw, Appert, Alex, Daube, Michael, Ahringer, Julie, Hajnal, Alex, Lattmann, Evelyn
הוצא לאור ב PLoS Genet (2020)

Stable Caenorhabditis elegans chromatin domains separate broadly expressed and developmentally regulated genes

מאת Evans, Kenneth J., Huang, Ni, Stempor, Przemyslaw, Chesney, Michael A., Down, Thomas A., Ahringer, Julie
הוצא לאור ב Proc Natl Acad Sci U S A (2016)

Comprehensive Analysis of Correlations in the Expression of miRNA Genes and Immune Checkpoint Genes in Bladder Cancer Cells

מאת Stempor, Przemysław A., Avni, Dror, Leibowitz, Raya, Sidi, Yechezkel, Stępień, Maria, Dzieciątkowski, Tomasz, Dobosz, Paula
הוצא לאור ב Int J Mol Sci (2021)

Extreme HOT regions are CpG-dense promoters in C. elegans and humans

מאת Chen, Ron A.-J., Stempor, Przemyslaw, Down, Thomas A., Zeiser, Eva, Feuer, Sky K., Ahringer, Julie
יצא לאור 2014

The DREAM complex promotes gene body H2A.Z for target repression

מאת Latorre, Isabel, Chesney, Michael A., Garrigues, Jacob M., Stempor, Przemyslaw, Appert, Alex, Francesconi, Mirko, Strome, Susan, Ahringer, Julie
הוצא לאור ב Genes Dev (2015)

Checkpoint Genes at the Cancer Side of the Immunological Synapse in Bladder Cancer

מאת Dobosz, Paula, Stempor, Przemysław A., Roszik, Jason, Herman, Amir, Layani, Adi, Berger, Raanan, Avni, Dror, Sidi, Yechezkel, Leibowitz-Amit, Raya
הוצא לאור ב Transl Oncol (2019)

The landscape of RNA polymerase II transcription initiation in C. elegans reveals promoter and enhancer architectures

מאת Chen, Ron A.-J., Down, Thomas A., Stempor, Przemyslaw, Chen, Q. Brent, Egelhofer, Thea A., Hillier, LaDeana W., Jeffers, Tess E., Ahringer, Julie
יצא לאור 2013

A team of heterochromatin factors collaborates with small RNA pathways to combat repetitive elements and germline stress

מאת McMurchy, Alicia N, Stempor, Przemyslaw, Gaarenstroom, Tessa, Wysolmerski, Brian, Dong, Yan, Aussianikava, Darya, Appert, Alex, Huang, Ni, Kolasinska-Zwierz, Paulina, Sapetschnig, Alexandra, Miska, Eric A, Ahringer, Julie
הוצא לאור ב eLife (2017)

Correction: A team of heterochromatin factors collaborates with small RNA pathways to combat repetitive elements and germline stress

מאת McMurchy, Alicia N, Stempor, Przemyslaw, Gaarenstroom, Tessa, Wysolmerski, Brian, Dong, Yan, Aussianikava, Darya, Appert, Alex, Huang, Ni, Kolasinska-Zwierz, Paulina, Sapetschnig, Alexandra, Miska, Eric A, Ahringer, Julie
הוצא לאור ב eLife (2017)

Chromatin accessibility dynamics across C. elegans development and ageing

מאת Jänes, Jürgen, Dong, Yan, Schoof, Michael, Serizay, Jacques, Appert, Alex, Cerrato, Chiara, Woodbury, Carson, Chen, Ron, Gemma, Carolina, Huang, Ni, Kissiov, Djem, Stempor, Przemyslaw, Steward, Annette, Zeiser, Eva, Sauer, Sascha, Ahringer, Julie
הוצא לאור ב eLife (2018)

Physical and functional interaction between SET1/COMPASS complex component CFP-1 and a Sin3S HDAC complex in C. elegans

מאת Beurton, Flore, Stempor, Przemyslaw, Caron, Matthieu, Appert, Alex, Dong, Yan, Chen, Ron A-j, Cluet, David, Couté, Yohann, Herbette, Marion, Huang, Ni, Polveche, Hélène, Spichty, Martin, Bedet, Cécile, Ahringer, Julie, Palladino, Francesca
הוצא לאור ב Nucleic Acids Res (2019)

H4K20me1 Contributes to Downregulation of X-Linked Genes for C. elegans Dosage Compensation

מאת Vielle, Anne, Lang, Jackie, Dong, Yan, Ercan, Sevinc, Kotwaliwale, Chitra, Rechtsteiner, Andreas, Appert, Alex, Chen, Q. Brent, Dose, Andrea, Egelhofer, Thea, Kimura, Hiroshi, Stempor, Przemyslaw, Dernburg, Abby, Lieb, Jason D., Strome, Susan, Ahringer, Julie
יצא לאור 2012

The USTC co-opts an ancient machinery to drive piRNA transcription in C. elegans

מאת Weng, Chenchun, Kosalka, Joanna, Berkyurek, Ahmet C., Stempor, Przemyslaw, Feng, Xuezhu, Mao, Hui, Zeng, Chenming, Li, Wen-Jun, Yan, Yong-Hong, Dong, Meng-Qiu, Morero, Natalia Rosalía, Zuliani, Cecilia, Barabas, Orsolya, Ahringer, Julie, Guang, Shouhong, Miska, Eric A.
הוצא לאור ב Genes Dev (2019)

Comparative analysis of metazoan chromatin organization

מאת Ho, Joshua W. K., Jung, Youngsook L., Liu, Tao, Alver, Burak H., Lee, Soohyun, Ikegami, Kohta, Sohn, Kyung-Ah, Minoda, Aki, Tolstorukov, Michael Y., Appert, Alex, Parker, Stephen C. J., Gu, Tingting, Kundaje, Anshul, Riddle, Nicole C., Bishop, Eric, Egelhofer, Thea A., Hu, Sheng’en Shawn, Alekseyenko, Artyom A., Rechtsteiner, Andreas, Asker, Dalal, Belsky, Jason A., Bowman, Sarah K., Chen, Q. Brent, Chen, Ron A-J, Day, Daniel S., Dong, Yan, Dose, Andrea C., Duan, Xikun, Epstein, Charles B., Ercan, Sevinc, Feingold, Elise A., Ferrari, Francesco, Garrigues, Jacob M., Gehlenborg, Nils, Good, Peter J., Haseley, Psalm, He, Daniel, Herrmann, Moritz, Hoffman, Michael M., Jeffers, Tess E., Kharchenko, Peter V., Kolasinska-Zwierz, Paulina, Kotwaliwale, Chitra V., Kumar, Nischay, Langley, Sasha A., Larschan, Erica N., Latorre, Isabel, Libbrecht, Maxwell W., Lin, Xueqiu, Park, Richard, Pazin, Michael J., Pham, Hoang N., Plachetka, Annette, Qin, Bo, Schwartz, Yuri B., Shoresh, Noam, Stempor, Przemyslaw, Vielle, Anne, Wang, Chengyang, Whittle, Christina M., Xue, Huiling, Kingston, Robert E., Kim, Ju Han, Bernstein, Bradley E., Dernburg, Abby F., Pirrotta, Vincenzo, Kuroda, Mitzi I., Noble, William S., Tullius, Thomas D., Kellis, Manolis, MacAlpine, David M., Strome, Susan, Elgin, Sarah C. R., Liu, Xiaole Shirley, Lieb, Jason D., Ahringer, Julie, Karpen, Gary H., Park, Peter J.
הוצא לאור ב Nature (2014)