Integrating proteomics and targeted metabolomics to understand global changes in histone modifications

af Simithy, Johayra, Sidoli, Simone, Garcia, Benjamin A.
Udgivet i Proteomics (2018)

Selective Mycobacterium tuberculosis Shikimate Kinase Inhibitors as Potential Antibacterials

af Gordon, Sara, Simithy, Johayra, Goodwin, Douglas C, Calderón, Angela I
Udgivet i Perspect Medicin Chem (2015)

Low resolution data-independent acquisition in an LTQ-Orbitrap allows for simplified and fully untargeted analysis of histone modifications

af Sidoli, Simone, Simithy, Johayra, Karch, Kelly R., Kulej, Katarzyna, Garcia, Benjamin A.
Udgivet i Anal Chem (2015)

EpiProfile 2.0: A Computational Platform for Processing Epi-Proteomics Mass Spectrometry Data

af Yuan, Zuo-Fei, Sidoli, Simone, Marchione, Dylan M., Simithy, Johayra, Janssen, Kevin A., Szurgot, Mary R., Garcia, Benjamin A.
Udgivet i J Proteome Res (2018)

Recognition of histone H3K14 acylation by MORF

af Klein, Brianna J., Simithy, Johayra, Wang, Xiaolu, Ahn, JaeWoo, Andrews, Forest H., Zhang, Yi, Côté, Jacques, Shi, Xiaobing, Garcia, Benjamin A., Kutateladze, Tatiana G.
Udgivet i Structure (2017)

Characterization of histone acylations links chromatin modifications with metabolism

af Simithy, Johayra, Sidoli, Simone, Yuan, Zuo-Fei, Coradin, Mariel, Bhanu, Natarajan V., Marchione, Dylan M., Klein, Brianna J., Bazilevsky, Gleb A., McCullough, Cheryl E., Magin, Robert S., Kutateladze, Tatiana G., Snyder, Nathaniel W., Marmorstein, Ronen, Garcia, Benjamin A.
Udgivet i Nat Commun (2017)

Cytoplasmic chromatin triggers inflammation in senescence and cancer

af Dou, Zhixun, Ghosh, Kanad, Vizioli, Maria Grazia, Zhu, Jiajun, Sen, Payel, Wangensteen, Kirk J., Simithy, Johayra, Lan, Yemin, Lin, Yanping, Zhou, Zhuo, Capell, Brian C., Xu, Caiyue, Xu, Mingang, Kieckhaefer, Julia E., Jiang, Tianying, Shoshkes-Carmel, Michal, Ahasan Al Tanim, K.M., Barber, Glen N., Seykora, John T., Millar, Sarah E., Kaestner, Klaus H., Garcia, Benjamin A., Adams, Peter D., Berger, Shelley L.
Udgivet i Nature (2017)

Targeting CDK9 Reactivates Epigenetically Silenced Genes in Cancer

af Zhang, Hanghang, Pandey, Somnath, Travers, Meghan, Sun, Hongxing, Morton, George, Madzo, Jozef, Chung, Woonbok, Khowsathit, Jittasak, Perez-Leal, Oscar, Barrero, Carlos A., Merali, Carmen, Okamoto, Yasuyuki, Sato, Takahiro, Pan, Joshua, Garriga, Judit, Bhanu, Natarajan V., Simithy, Johayra, Patel, Bela, Huang, Jian, Raynal, Noël J.-M., Garcia, Benjamin A., Jacobson, Marlene A., Kadoch, Cigall, Merali, Salim, Zhang, Yi, Childers, Wayne, Abou-Gharbia, Magid, Karanicolas, John, Baylin, Stephen B., Zahnow, Cynthia A., Jelinek, Jaroslav, Graña, Xavier, Issa, Jean-Pierre J.
Udgivet i Cell (2018)