Integrating proteomics and targeted metabolomics to understand global changes in histone modifications

Por Simithy, Johayra, Sidoli, Simone, Garcia, Benjamin A.
Publicado no Proteomics (2018)

Selective Mycobacterium tuberculosis Shikimate Kinase Inhibitors as Potential Antibacterials

Por Gordon, Sara, Simithy, Johayra, Goodwin, Douglas C, Calderón, Angela I
Publicado no Perspect Medicin Chem (2015)

Low resolution data-independent acquisition in an LTQ-Orbitrap allows for simplified and fully untargeted analysis of histone modifications

Por Sidoli, Simone, Simithy, Johayra, Karch, Kelly R., Kulej, Katarzyna, Garcia, Benjamin A.
Publicado no Anal Chem (2015)

EpiProfile 2.0: A Computational Platform for Processing Epi-Proteomics Mass Spectrometry Data

Por Yuan, Zuo-Fei, Sidoli, Simone, Marchione, Dylan M., Simithy, Johayra, Janssen, Kevin A., Szurgot, Mary R., Garcia, Benjamin A.
Publicado no J Proteome Res (2018)

Recognition of histone H3K14 acylation by MORF

Por Klein, Brianna J., Simithy, Johayra, Wang, Xiaolu, Ahn, JaeWoo, Andrews, Forest H., Zhang, Yi, Côté, Jacques, Shi, Xiaobing, Garcia, Benjamin A., Kutateladze, Tatiana G.
Publicado no Structure (2017)

Characterization of histone acylations links chromatin modifications with metabolism

Por Simithy, Johayra, Sidoli, Simone, Yuan, Zuo-Fei, Coradin, Mariel, Bhanu, Natarajan V., Marchione, Dylan M., Klein, Brianna J., Bazilevsky, Gleb A., McCullough, Cheryl E., Magin, Robert S., Kutateladze, Tatiana G., Snyder, Nathaniel W., Marmorstein, Ronen, Garcia, Benjamin A.
Publicado no Nat Commun (2017)

Cytoplasmic chromatin triggers inflammation in senescence and cancer

Por Dou, Zhixun, Ghosh, Kanad, Vizioli, Maria Grazia, Zhu, Jiajun, Sen, Payel, Wangensteen, Kirk J., Simithy, Johayra, Lan, Yemin, Lin, Yanping, Zhou, Zhuo, Capell, Brian C., Xu, Caiyue, Xu, Mingang, Kieckhaefer, Julia E., Jiang, Tianying, Shoshkes-Carmel, Michal, Ahasan Al Tanim, K.M., Barber, Glen N., Seykora, John T., Millar, Sarah E., Kaestner, Klaus H., Garcia, Benjamin A., Adams, Peter D., Berger, Shelley L.
Publicado no Nature (2017)

Targeting CDK9 Reactivates Epigenetically Silenced Genes in Cancer

Por Zhang, Hanghang, Pandey, Somnath, Travers, Meghan, Sun, Hongxing, Morton, George, Madzo, Jozef, Chung, Woonbok, Khowsathit, Jittasak, Perez-Leal, Oscar, Barrero, Carlos A., Merali, Carmen, Okamoto, Yasuyuki, Sato, Takahiro, Pan, Joshua, Garriga, Judit, Bhanu, Natarajan V., Simithy, Johayra, Patel, Bela, Huang, Jian, Raynal, Noël J.-M., Garcia, Benjamin A., Jacobson, Marlene A., Kadoch, Cigall, Merali, Salim, Zhang, Yi, Childers, Wayne, Abou-Gharbia, Magid, Karanicolas, John, Baylin, Stephen B., Zahnow, Cynthia A., Jelinek, Jaroslav, Graña, Xavier, Issa, Jean-Pierre J.
Publicado no Cell (2018)