Integrating proteomics and targeted metabolomics to understand global changes in histone modifications

Autor Simithy, Johayra, Sidoli, Simone, Garcia, Benjamin A.
Vydáno v Proteomics (2018)

Selective Mycobacterium tuberculosis Shikimate Kinase Inhibitors as Potential Antibacterials

Autor Gordon, Sara, Simithy, Johayra, Goodwin, Douglas C, Calderón, Angela I
Vydáno v Perspect Medicin Chem (2015)

Low resolution data-independent acquisition in an LTQ-Orbitrap allows for simplified and fully untargeted analysis of histone modifications

Autor Sidoli, Simone, Simithy, Johayra, Karch, Kelly R., Kulej, Katarzyna, Garcia, Benjamin A.
Vydáno v Anal Chem (2015)

EpiProfile 2.0: A Computational Platform for Processing Epi-Proteomics Mass Spectrometry Data

Autor Yuan, Zuo-Fei, Sidoli, Simone, Marchione, Dylan M., Simithy, Johayra, Janssen, Kevin A., Szurgot, Mary R., Garcia, Benjamin A.
Vydáno v J Proteome Res (2018)

Recognition of histone H3K14 acylation by MORF

Autor Klein, Brianna J., Simithy, Johayra, Wang, Xiaolu, Ahn, JaeWoo, Andrews, Forest H., Zhang, Yi, Côté, Jacques, Shi, Xiaobing, Garcia, Benjamin A., Kutateladze, Tatiana G.
Vydáno v Structure (2017)

Characterization of histone acylations links chromatin modifications with metabolism

Autor Simithy, Johayra, Sidoli, Simone, Yuan, Zuo-Fei, Coradin, Mariel, Bhanu, Natarajan V., Marchione, Dylan M., Klein, Brianna J., Bazilevsky, Gleb A., McCullough, Cheryl E., Magin, Robert S., Kutateladze, Tatiana G., Snyder, Nathaniel W., Marmorstein, Ronen, Garcia, Benjamin A.
Vydáno v Nat Commun (2017)

Cytoplasmic chromatin triggers inflammation in senescence and cancer

Autor Dou, Zhixun, Ghosh, Kanad, Vizioli, Maria Grazia, Zhu, Jiajun, Sen, Payel, Wangensteen, Kirk J., Simithy, Johayra, Lan, Yemin, Lin, Yanping, Zhou, Zhuo, Capell, Brian C., Xu, Caiyue, Xu, Mingang, Kieckhaefer, Julia E., Jiang, Tianying, Shoshkes-Carmel, Michal, Ahasan Al Tanim, K.M., Barber, Glen N., Seykora, John T., Millar, Sarah E., Kaestner, Klaus H., Garcia, Benjamin A., Adams, Peter D., Berger, Shelley L.
Vydáno v Nature (2017)

Targeting CDK9 Reactivates Epigenetically Silenced Genes in Cancer

Autor Zhang, Hanghang, Pandey, Somnath, Travers, Meghan, Sun, Hongxing, Morton, George, Madzo, Jozef, Chung, Woonbok, Khowsathit, Jittasak, Perez-Leal, Oscar, Barrero, Carlos A., Merali, Carmen, Okamoto, Yasuyuki, Sato, Takahiro, Pan, Joshua, Garriga, Judit, Bhanu, Natarajan V., Simithy, Johayra, Patel, Bela, Huang, Jian, Raynal, Noël J.-M., Garcia, Benjamin A., Jacobson, Marlene A., Kadoch, Cigall, Merali, Salim, Zhang, Yi, Childers, Wayne, Abou-Gharbia, Magid, Karanicolas, John, Baylin, Stephen B., Zahnow, Cynthia A., Jelinek, Jaroslav, Graña, Xavier, Issa, Jean-Pierre J.
Vydáno v Cell (2018)