Matrix eQTL: ultra fast eQTL analysis via large matrix operations

door Shabalin, Andrey A.
Gepubliceerd in 2012

Candidate gene methylation studies are at high risk of erroneous conclusions

door Shabalin, Andrey A, Aberg, Karolina A
Gepubliceerd in Epigenomics (2015)

Computational tools for discovery and interpretation of expression quantitative trait loci

door Wright, Fred A, Shabalin, Andrey A, Rusyn, Ivan
Gepubliceerd in 2012

Estimation of cis-eQTL Effect Sizes Using a Log of Linear Model

door Palowitch, John, Shabalin, Andrey, Zhou, Yi-Hui, Nobel, Andrew B., Wright, Fred A.
Gepubliceerd in Biometrics (2017)

An empirical Bayes approach for multiple tissue eQTL analysis

door Li, Gen, Shabalin, Andrey A, Rusyn, Ivan, Wright, Fred A, Nobel, Andrew B
Gepubliceerd in Biostatistics (2018)

Polygenic Risk Scoring and Prediction of Mental Health Outcomes

door Anderson, John S., Shade, Jess, DiBlasi, Emily, Shabalin, Andrey A., Docherty, Anna R.
Gepubliceerd in Curr Opin Psychol (2018)

FastMap: Fast eQTL mapping in homozygous populations

door Gatti, Daniel M., Shabalin, Andrey A., Lam, Tieu-Chong, Wright, Fred A., Rusyn, Ivan, Nobel, Andrew B.
Gepubliceerd in 2009

The Set2/Rpd3S Pathway Suppresses Cryptic Transcription without Regard to Gene Length or Transcription Frequency

door Lickwar, Colin R., Rao, Bhargavi, Shabalin, Andrey A., Nobel, Andrew B., Strahl, Brian D., Lieb, Jason D.
Gepubliceerd in 2009

Sex-specific gene expression in the BXD mouse liver

door Gatti, Daniel M., Zhao, Ni, Chesler, Elissa J., Bradford, Blair U., Shabalin, Andrey A., Yordanova, Roumyana, Lu, Lu, Rusyn, Ivan
Gepubliceerd in 2010

Polygenic prediction of PTSD trajectories in 9/11 responders

door Waszczuk, Monika A., Docherty, Anna R., Shabalin, Andrey A., Miao, Jiaju, Yang, Xiaohua, Kuan, Pei-Fen, Bromet, Evelyn, Kotov, Roman, Luft, Benjamin J.
Gepubliceerd in Psychol Med (2020)

seeQTL: a searchable database for human eQTLs

door Xia, Kai, Shabalin, Andrey A., Huang, Shunping, Madar, Vered, Zhou, Yi-Hui, Wang, Wei, Zou, Fei, Sun, Wei, Sullivan, Patrick F., Wright, Fred A.
Gepubliceerd in 2012

RaMWAS: fast methylome-wide association study pipeline for enrichment platforms

door Shabalin, Andrey A, Hattab, Mohammad W, Clark, Shaunna L, Chan, Robin F, Kumar, Gaurav, Aberg, Karolina A, van den Oord, Edwin J C G
Gepubliceerd in Bioinformatics (2018)

Test-statistic inflation in methylome-wide association studies

door Guintivano, Jerry, Shabalin, Andrey A, Chan, Robin F., Rubinow, David R., Sullivan, Patrick F., Meltzer-Brody, Samantha, Aberg, Karolina a, van den Oord, Edwin J. C. G.
Gepubliceerd in Epigenetics (2020)

A MBD-seq protocol for large-scale methylome-wide studies with (very) low amounts of DNA

door Aberg, Karolina A., Chan, Robin F., Shabalin, Andrey A., Zhao, Min, Turecki, Gustavo, Staunstrup, Nicklas Heine, Starnawska, Anna, Mors, Ole, Xie, Lin Y., van den Oord, Edwin JCG
Gepubliceerd in Epigenetics (2017)

Enrichment methods provide a feasible approach to comprehensive and adequately powered investigations of the brain methylome

door Chan, Robin F., Shabalin, Andrey A., Xie, Lin Y., Adkins, Daniel E., Zhao, Min, Turecki, Gustavo, Clark, Shaunna L., Aberg, Karolina A., van den Oord, Edwin J.C.G.
Gepubliceerd in Nucleic Acids Res (2017)

Molecular Genetic Risk for Psychosis Is Associated With Psychosis Risk Symptoms in a Population-Based UK Cohort: Findings From Generation Scotland

door Docherty, Anna R, Shabalin, Andrey A, Adkins, Daniel E, Mann, Frank, Krueger, Robert F, Bacanu, Silviu-Alin, Campbell, Archie, Hayward, Caroline, Porteous, David J, McIntosh, Andrew M, Kendler, Kenneth S
Gepubliceerd in Schizophr Bull (2020)

Assessment of suicide attempt and death in bipolar affective disorder: a combined clinical and genetic approach

door Monson, Eric T., Shabalin, Andrey A., Docherty, Anna R., DiBlasi, Emily, Bakian, Amanda V., Li, Qingqin S., Gray, Douglas, Keeshin, Brooks, Crowell, Sheila E., Mullins, Niamh, Willour, Virginia L., Coon, Hilary
Gepubliceerd in Transl Psychiatry (2021)

A Whole Methylome CpG-SNP Association Study of Psychosis in Blood and Brain Tissue

door van den Oord, Edwin J. C. G., Clark, Shaunna L., Xie, Lin Ying, Shabalin, Andrey A., Dozmorov, Mikhail G., Kumar, Gaurav, Vladimirov, Vladimir I., Magnusson, Patrik K. E., Aberg, Karolina A.
Gepubliceerd in Schizophr Bull (2016)

Independent Methylome-Wide Association Studies of Schizophrenia Detect Consistent Case–Control Differences

door Chan, Robin F, Shabalin, Andrey A, Montano, Carolina, Hannon, Eilis, Hultman, Christina M, Fallin, Margaret D, Feinberg, Andrew P, Mill, Jonathan, van den Oord, Edwin J C G, Aberg, Karolina A
Gepubliceerd in Schizophr Bull (2020)

Quantitative Trait Locus Mapping Methods for Diversity Outbred Mice

door Gatti, Daniel M., Svenson, Karen L., Shabalin, Andrey, Wu, Long-Yang, Valdar, William, Simecek, Petr, Goodwin, Neal, Cheng, Riyan, Pomp, Daniel, Palmer, Abraham, Chesler, Elissa J., Broman, Karl W., Churchill, Gary A.
Gepubliceerd in 2014